EY727691

Overview
NameEY727691
Unique NameEY727691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1063
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB2_ORYSJ (Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp. japonica GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.855e-12
Identity = 33/82 (40.24%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  183 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            G  ++D  LP A +++I+K+ +PA+ ++A+DA++ L EC  EFI+ V+SE+++ C +E ++TI  E +L A+  LGF EY++
Sbjct:   31 GVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVD 112          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.575e-12
Identity = 31/89 (34.83%), Postives = 63/89 (70.79%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 458
            ++D  LP A +++I+K+ +PA+ ++A+DA++ + EC  EFI+ ++SE+++ C RE ++TI  + +L A+  LGF +YIE +    ++++
Sbjct:   31 EQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYR 119          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB8_ARATH (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana GN=NFYB8 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.122e-11
Identity = 32/79 (40.51%), Postives = 58/79 (73.42%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            ++D  LP A +++I+K  LPA+ ++A+DA++++ EC  EFI+ V+SE+++ C RE ++TI  + +L A+  LGF +Y+E
Sbjct:   30 EQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYME 108          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.465e-11
Identity = 29/89 (32.58%), Postives = 62/89 (69.66%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 458
            ++D  LP A +++I+K+ LPA+ ++++DA++ + EC  EFI+ ++ E+++ C RE ++TI  + +L A+  LGF +Y+E +    ++++
Sbjct:   21 EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYR 109          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.913e-11
Identity = 30/79 (37.97%), Postives = 54/79 (68.35%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            ++D  +P A + +I++ +LPA  +++ D+++ + EC  E+I+ ++ E+NE C RE ++TI  E VL A+  LGF +YIE
Sbjct:   58 EQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIE 136          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.263e-11
Identity = 29/79 (36.71%), Postives = 57/79 (72.15%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            ++D  LP A +++I+K+ LPA+ ++++DA++ + EC  EFI+ V+ E+++ C +E ++TI  + +L A+  LGF +Y+E
Sbjct:   27 EQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVE 105          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB_PETMA (Nuclear transcription factor Y subunit beta OS=Petromyzon marinus GN=NFYB PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.262e-11
Identity = 30/89 (33.71%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 458
            ++D  LP A + +I+K  +P+  ++A+DA++ + EC  EFI+ ++SE++E C +E ++TI  E +L A+  LGF  Y+E +    ++++
Sbjct:   55 EQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKQYLQKYR 143          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB_DICDI (Nuclear transcription factor Y subunit beta OS=Dictyostelium discoideum GN=nfyB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.566e-11
Identity = 30/82 (36.59%), Postives = 56/82 (68.29%), Query Frame = 3
Query:  183 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            G  ++D  LP A + +I+K+ LP + +VA+DA++ + +C  EFI+ ++SE+++ C +E ++TI  E ++ A+  LGF  Y+E
Sbjct:   45 GDREQDRYLPIANIIRIMKKALPNNAKVAKDAKETVQDCVSEFISFITSEASDKCQQEKRKTINGEDIIAAMVSLGFENYVE 126          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYBA_ARATH (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.269e-11
Identity = 31/79 (39.24%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            ++D  LP A +++I+K  LP + ++A+DA++ + EC  EFI+ V+SE+++ C RE ++TI  + +L A+  LGF +YI+
Sbjct:   29 EQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYID 107          
BLAST of EY727691 vs. ExPASy Swiss-Prot
Match: NFYB_RAT (Nuclear transcription factor Y subunit beta OS=Rattus norvegicus GN=Nfyb PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 9.494e-11
Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 3
Query:  192 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIE 428
            ++D  LP A + +I+K  +P   ++A+DA++ + EC  EFI+ ++SE++E C +E ++TI  E +L A+  LGF  Y+E
Sbjct:   54 EQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVE 132          
The following BLAST results are available for this feature:
BLAST of EY727691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
NFYB2_ORYSJ3.855e-1240.24Nuclear transcription factor Y subunit B-2 OS=Oryz... [more]
NFYB_MAIZE6.575e-1234.83Nuclear transcription factor Y subunit B OS=Zea ma... [more]
NFYB8_ARATH1.122e-1140.51Nuclear transcription factor Y subunit B-8 OS=Arab... [more]
NFYB3_ARATH1.465e-1132.58Nuclear transcription factor Y subunit B-3 OS=Arab... [more]
NFYB6_ARATH1.913e-1137.97Nuclear transcription factor Y subunit B-6 OS=Arab... [more]
NFYB2_ARATH3.263e-1136.71Nuclear transcription factor Y subunit B-2 OS=Arab... [more]
NFYB_PETMA4.262e-1133.71Nuclear transcription factor Y subunit beta OS=Pet... [more]
NFYB_DICDI5.566e-1136.59Nuclear transcription factor Y subunit beta OS=Dic... [more]
NFYBA_ARATH7.269e-1139.24Nuclear transcription factor Y subunit B-10 OS=Ara... [more]
NFYB_RAT9.494e-1137.97Nuclear transcription factor Y subunit beta OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-D06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727691 ID=EY727691; Name=EY727691; organism=Citrus sinensis; type=EST; length=1063bp
ATTTTTTTGGGAACCGTCGGTCGGGTCGGGATTTCCGGGTCGACCCCGCG
TCCGACTGAATCGTCCCTCGACTCGGATCTTAACTCGACTGACTCGTTTT
CTGCATCCTTAGTTGATTCTCTCGTTTCTCTGTTCGACTCGGTTCGGTGA
CTCGATTAAAGATGGAGCCGATGGATATTGTTGGAAAGTCAAAGGAGGAC
GCATCGCTCCCAAAAGCTACAATGACTAAAATTATAAAAGAGATGTTGCC
AGCAGATGTACGTGTTGCAAGAGATGCTCAAGATCTTTTGATTGAGTGTT
GTGTAGAGTTTATAAATCTTGTTTCCTCTGAGTCCAATGAAGTTTGCAGC
AGGGAGGATAAAAGAACAATTGCTCCCGAGCATGTACTCAAGGCTTTGGA
GGTTCTTGGGTTTGGTGAGTACATCGAGGAGGTCTATGCTGCATACGAGC
AACACAAGTCTTGAGACTATGGACTCGTTGAAAGGTGGCAAATGGAGCAA
TGGGGCCGAGATGACGGAGGAAGAAGCAGCGGCTGAGCAGCAAAAAATGT
TTGCCGAGGCACGTGGCACGAATGAACGGGTGAAGCCGCTGGCCCTCCCC
AGCAACCGGAAATTAACCCAAGTTTTAAAAAGAGCTTAATTAACTATTAG
GGATTTTTAATTTTTCCTCCGCCCCTAAGGCAAACATCCCTTGGAAATCT
TTTCGGTTCTGGCCTTTTTAGTCCCCCTTAAATTTATGTAAAAAAAAGCC
TTTTGGGAAGGGGAAATAACCCCATTGGGGGGAAAAGGCCCTTCTCCCTT
TTTGATACTTTTTACTTTAGGGGATTAATTGGGTCTTTAAAATTTAAAGG
TAAATTTTAGGGGGGCGTTTTGGTTTCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAGGGGGGGGGGCCCCCTTCTAAAAAGGGTATCT
CACAATATTTTATACATATCCCGGGGGGGGGGGGGGAAAGCGCACAAATA
ATCTCTTTTTTCTTATAAAATGGGGGGACCCCCACAAAAAAAATATTTTA
TTATTCATTTCAC
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