EY753977

Overview
NameEY753977
Unique NameEY753977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753977 vs. ExPASy Swiss-Prot
Match: UCHL3_BOVIN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12
Identity = 66/231 (28.57%), Postives = 105/231 (45.45%), Query Frame = 1
Query:  112 WCTIESDPGVFTELIQQIQV--KGVQVXXXXXXXXXXXXXXRPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 762
            W  +E++P V  + ++Q+ +      V              RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N  D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER    E+RFN +A
Sbjct:    6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESASMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DPDELRFNAIA 226          
BLAST of EY753977 vs. ExPASy Swiss-Prot
Match: UCHL3_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus GN=Uchl3 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 66/231 (28.57%), Postives = 105/231 (45.45%), Query Frame = 1
Query:  112 WCTIESDPGVFTELIQQIQV--KGVQVXXXXXXXXXXXXXXRPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 762
            W  +E++P V  + ++Q+ +      V              RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N  D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER    E+RFN +A
Sbjct:    6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERAKFLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-DPDELRFNAIA 226          
BLAST of EY753977 vs. ExPASy Swiss-Prot
Match: UCHL3_HUMAN (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens GN=UCHL3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 66/231 (28.57%), Postives = 105/231 (45.45%), Query Frame = 1
Query:  112 WCTIESDPGVFTELIQQIQV--KGVQVXXXXXXXXXXXXXXRPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 762
            W  +E++P V  + ++Q+ +      V              RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N  D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER    E+RFN +A
Sbjct:    6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DPDELRFNAIA 226          
BLAST of EY753977 vs. ExPASy Swiss-Prot
Match: UCHL3_RAT (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus GN=Uchl3 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12
Identity = 66/231 (28.57%), Postives = 104/231 (45.02%), Query Frame = 1
Query:  112 WCTIESDPGVFTELIQQIQV--KGVQVXXXXXXXXXXXXXXRPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 762
            W  +E++P V  + ++Q+ +      V              RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T  ++  + N  D    + G  L K  E +    PE +   + N DAIR  H + A        + +A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER    E+RFN +A
Sbjct:    6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-DPDELRFNAIA 226          
BLAST of EY753977 vs. ExPASy Swiss-Prot
Match: UCHL4_MOUSE (Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus GN=Uchl4 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11
Identity = 67/234 (28.63%), Postives = 106/234 (45.30%), Query Frame = 1
Query:  112 WCTIESDPGVFTELIQQIQV--KGVQVXXXXXXXXXXXXXXRPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSIL---LNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 762
            W  +E++P V  + ++Q+ +      V              RPV  ++ LF    K+     ++   IK    D   +++F  Q I+NAC T   + ++    N  D    + G  L K  E + +  PE +   + N DAIR  H + A        + +A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+ V  V ++ +ER    E+RFN +A
Sbjct:    6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKFLEESVSMSPEERAKYLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHLYELDGWKPFPINHGKTS----DETLLEDVIKVCKKFMER-DPDELRFNAIA 229          
BLAST of EY753977 vs. ExPASy Swiss-Prot
Match: UCHL3_PIG (Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa GN=UCHL3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 63/231 (27.27%), Postives = 105/231 (45.45%), Query Frame = 1
Query:  112 WCTIESDPGVFTELIQQIQV--KGVQVXXXXXXXXXXXXXXRPVYGLIFLF----KWRPGEKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMA 762
            W  +E++P V  + ++Q+ +      V              RPV  ++ LF    K+     ++   IK    D  P+++F  Q I+NAC T  ++  + N  +    + G  L K  E + +  P+ +   + + DAI   H + A        + +A   D+ V  HFI+ + VDG LYELDG K  PI+ G  +    D   L+    V ++ +ER    E+RFN +A
Sbjct:    6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTPSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKFLEESASMSPDERARYLESYDAIPVTHETSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DPDELRFNAIA 226          
The following BLAST results are available for this feature:
BLAST of EY753977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
UCHL3_BOVIN1.087e-1228.57Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_MOUSE1.420e-1228.57Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_HUMAN1.420e-1228.57Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL3_RAT3.163e-1228.57Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]
UCHL4_MOUSE1.570e-1128.63Ubiquitin carboxyl-terminal hydrolase isozyme L4 O... [more]
UCHL3_PIG2.677e-1127.27Ubiquitin carboxyl-terminal hydrolase isozyme L3 O... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-B04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753977 ID=EY753977; Name=EY753977; organism=Citrus sinensis; type=EST; length=929bp
CCGGNNATTAAAAACCTGACCCACGCGTCCGGCAACACACATACAACTAC
TCTCGAGCCGCCGCTCCGCTTTCACTCACCACCCAGCTAAAGAACGTTCC
GAATCATGTCGTGGTGCACTATCGAGTCTGATCCTGGCGTGTTTACTGAA
CTTATACAACAAATTCAAGTAAAAGGCGTTCAGGTTGAGGAGTTGTATTC
CCTGGACCTTGATTCTCTTAACAATCTGAGGCCTGTCTATGGGTTGATTT
TCCTTTTCAAATGGCGTCCAGGGGAAAAAGATGACCGTGTTGTGATTAAG
GATCCAAATCCTAACTTGTTTTTTGCCAGCCAGGTCATTAATAATGCCTG
TGCAACACAAGCAATCTTGTCTATCCTCCTGAATTGTCCAGATATCGACA
TTGGCCCGGAATTGTCAAAGTTGAAAGAGTTTACCAAGAACTTTCCACCG
GAACTCAAAGGTTTGGCTATCAACAACAGTGATGCAATACGGGCAGCCCA
TAATAGTTTTGCTAGGCCGGAGCCTTTTGTTCCTGAGGAGCAGAAGGCTG
CTGGCAAAGATGATGATGTGTACCATTTTATAAGCTATATACCTGTTGAT
GGGGTACTGTATGAACTCGATGGACTTAAGGAAGGGCCCATTAGCCTTGG
TCCATGCACTGGCGGGCAAGGTGACATGGATTGGCTGCAGATGGTGCAAC
CAGTGATCCAAGAACGCATTGAAAGGTATTCCAAAAGTGAGATAAGATTC
AATCTAATGGCAGNTATAAAGAACAGAAAAAGAATGTACACTGCTGAACT
CAAGGAGTTTAAAAGGAGAAGGAACGCATNCTGCAGCAGCTTGCTTTCTT
GCAGTCAGAGAGAATGGTGGACAAAACCAGTTTTGAAGCACTTAATAATC
ACTTTCCGAAATAATGCTGGAATTGAAGT
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