EY753966

Overview
NameEY753966
Unique NameEY753966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI1_CAEEL (3'-5' exonuclease eri-1 OS=Caenorhabditis elegans GN=eri-1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.880e-20
Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 2
Query:   35 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLE--NKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGV-----RCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLM 517
            YP EIIE P+V++     ++ + F+TYVRP  N  LS+FC   T I Q  VD      EAL R   W+   N G KN+ FA VT    D    ++ +C    I  P  F  +IN+K  F E F G+     +  ++  +E   L++ G  H GLDDA N A +   +M
Sbjct:  167 YPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKLSEFCMQFTKIAQETVDAAPYFREALQRLYTWMRKFNLGQKNSRFAFVTDGPHDMWKFMQFQCLLSNIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIAAIAIQMM 334          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: Y3514_ARATH (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 48/173 (27.75%), Postives = 82/173 (47.40%), Query Frame = 2
Query:   44 EIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLSDFCKDL---TGIQQIQVDRGVTLSEALLRHDKWLENKGI--KNTNF-----AVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRG 526
            EI+EFP +IV + T ++   F  +VRPT    Q ++ + +      G+ ++  D  +   + +   + WL    +  K+T++     A VT  NWD +  +  +C    I  PPYF  WINLK  +   +G     +   +   G+   G  H G+DD KN  R++  ++  G
Sbjct:  139 EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRMLSEG 311          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: CRN4_CAEEL (Cell death-related nuclease 4 OS=Caenorhabditis elegans GN=crn-4 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13
Identity = 57/225 (25.33%), Postives = 91/225 (40.44%), Query Frame = 2
Query:    5 EXXGDTXKNPYPQEIIEFPSVIVSSVTGQL--EACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEALLRHDKWLENKGIKNTNFAVVTWSNWDCRVMLESECRFKKIWKPPYFNRWINLKVPFHEVFG-------GVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLLALLMHRGXKXCITNFLMWQTHDGSLTWNQXPERILLXPNWVAKQKELGK 652
            E   D     YP E+I+F  V       ++  +  F  YV+P  N+ L+  C D TGI Q  +D   T      +  +WL   G++   FA V  S  D   + + + +   I  P +F ++INL   F                N+ +  E   L   GRAH  +DD  N A +L  +++ G K  +   L         +W + P  ++    W +   + GK
Sbjct:   17 ETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEYYDLPTIGRAHDAMDDCLNIATILQRMINMGAKVTVNELLTC-----CASWRRQP--LVYNKEWRSSFMDAGK 234          
BLAST of EY753966 vs. ExPASy Swiss-Prot
Match: ERI1_SCHPO (3'-5' exonuclease eri1 OS=Schizosaccharomyces pombe GN=eri1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = 2
Query:   35 YPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCKDLTGIQQIQVDRGVTLSEA-------LLRHDKWL-----------ENKGIKNT---NFAVVTWSNWDCRVMLESECRFKKIWKPPYF-NRWINLKVPFHEVFGGVRCNLKEAVEMAGLAWQGRAHCGLDDAKNTARLL 505
            +  EIIE P ++   +   +   F +YVRP+ N  LSD+CK LTGIQQ  VD+    S+        L +H   L             K +  T   N+A      WD    L  + ++ K+  P +    +++++  + +V+   R N+   +E  GL ++G  H G+DDA+N +R++
Sbjct:   99 FENEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYCKSLTGIQQCTVDKAPIFSDVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWAWACDGPWDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQFEGSEHRGIDDARNLSRIV 277          
The following BLAST results are available for this feature:
BLAST of EY753966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERI1_CAEEL3.880e-2036.313'-5' exonuclease eri-1 OS=Caenorhabditis elegans ... [more]
Y3514_ARATH6.410e-1527.75Uncharacterized exonuclease domain-containing prot... [more]
CRN4_CAEEL1.579e-1325.33Cell death-related nuclease 4 OS=Caenorhabditis el... [more]
ERI1_SCHPO3.517e-1328.493'-5' exonuclease eri1 OS=Schizosaccharomyces pomb... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-A03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753966 ID=EY753966; Name=EY753966; organism=Citrus sinensis; type=EST; length=890bp
ATNNGAGGNTANTGGAGACACGNACAAGAATCCTTATCCCCAGGAGATAA
TCGAGTTTCCATCTGTCATTGTGAGTAGTGTAACTGGTCAACTGGAAGCA
TGTTTTCAGACATATGTGCGGCCGACTTGCAATCAACTACTGAGTGATTT
TTGCAAGGATCTGACAGGTATCCAGCAAATTCAGGTGGACAGAGGTGTTA
CTCTAAGCGAGGCTTTACTTAGGCATGACAAATGGCTTGAGAATAAGGGC
ATAAAAAACACCAACTTTGCTGTCGTGACATGGTCAAATTGGGATTGTCG
GGTAATGTTGGAATCTGAATGCCGATTCAAAAAGATTTGGAAACCTCCTT
ATTTTAACAGATGGATCAACTTAAAAGTTCCATTTCATGAGGTTTTTGGT
GGAGTGAGGTGCAATTTAAAAGAAGCTGTTGAGATGGCAGGCCTGGCATG
GCAAGGCCGTGCACACTGTGGCCTAGATGATGCGAAAAATACTGCTCGCC
TACTTGCACTCCTCATGCACAGAGGGNCCAAATNCTGCATTACAAACTTT
TTGATGTGGCAGACACATGATGGTTCTTTGACATGGAATCAGNTTCCTGA
ACGCATATTGCTTNCACCAAATTGGGTGGCCAAACAAAAGGAGCTTGGCA
AATTCCTTTTTCCAGTATCATCCTAAGTGGTTTGTGGGGGGTGAAAAGCA
GCAAAGGGATGGGTTCGAAGCCTGGGACCAAAACAGGGGAATGTTTTTTT
TGGGGGGCGGAAATTGGATTGGTACTTTAAGTGGCCCGTGGGAATTTGTT
GGTTGGCGCCTTTACTACGGCCTTTCTGGAAAGTATGGATGGGATCTCCA
TTCTTTCTGGTTGACATGTCAAACCTTTAAAAAAAATATA
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