EY753954

Overview
NameEY753954
Unique NameEY753954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM1_MOUSE (S-adenosylmethionine decarboxylase proenzyme 1 OS=Mus musculus GN=Amd1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.535e-27
Identity = 76/193 (39.38%), Postives = 111/193 (57.51%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSL--SVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 567
            S+FV   + I+KTCGTT LL ++  +LKLA   S   S++S  Y+R +F+    Q +PHR+F EE+  L+  F     +  A+ MG   N+  W++Y+        ++ P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE
Sbjct:   69 SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFP----NGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFE 256          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 80/203 (39.41%), Postives = 110/203 (54.19%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSLSV-RSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASA------------QAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSI-EGDAVSTIHVTPEDGFSYASFE 567
            S+FV   + I+KTCGTT  L  +  +LKLAE+   +V   + Y+R +F    AQ  PH+ F+EEV  LD  F     +  ++ +GS  N + W++Y+ S             +     +P  T+E+ M  LD +  S+FYK   + A   T  SGI  ILP   I DF FDPCGYSMN I +     TIH+TPE+ FSY SFE
Sbjct:   67 SMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNVVADLFYSRKNFTRPEAQITPHQGFTEEVTYLDSIFP----NGRSYCLGSM-NLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFE 264          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM2_MUSSP (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus spretus GN=Amd2 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 76/193 (39.38%), Postives = 111/193 (57.51%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSL--SVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 567
            S+FV   + I+KTCGTT LL ++  +LKLA   S   S++S  Y+R +F+    Q +PHR+F EE+  L+  F     +  A+ MG   N+  W++Y+        ++ P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE
Sbjct:   69 SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNVIFP----NGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFE 256          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM2_MOUSE (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus musculus GN=Amd2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.124e-26
Identity = 76/193 (39.38%), Postives = 111/193 (57.51%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSL--SVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 567
            S+FV   + I+KTCGTT LL ++  +LKLA   S   S++S  Y+R +F+    Q +PHR+F EE+  L+  F     +  A+ MG   N+  W++Y+        ++ P  TLE+ M+ LD      FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE
Sbjct:   69 SIFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNVIFP----NGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFE 256          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_ONCVO (S-adenosylmethionine decarboxylase proenzyme OS=Onchocerca volvulus GN=smd-1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.798e-25
Identity = 76/204 (37.25%), Postives = 103/204 (50.49%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSL--SVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFE-FDPCGYSMNSI--EGDAVSTIHVTPEDGFSYASFEAVGYDF*GCE 597
            S+F+  +++I+KTCGTT+LL +I  IL +A+      +V SV Y+R +F+    QP+PH SF  EV  L+ HF       +A+ +G P    RW +Y+          P +TLE+ M GL     S F              S I  ILP   +   E F PCGYS+N +    D   TIHVTPE  FSY SFE   +    CE
Sbjct:   88 SMFISDFRIILKTCGTTRLLHAIERILHIAKIYCNMDNVVSVFYSRKNFMHPEKQPYPHSSFETEVDYLEEHFA----GGSAYCIG-PQRQDRWFLYTMVTPQAVFPFPEHTLEILMNGLPEDVLSTFSPNVSKDGKDCRMKSAINTILPPDIVVHEELFSPCGYSLNGLIPHSDHYITIHVTPEPDFSYVSFETNQHTLNLCE 286          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_XENLA (S-adenosylmethionine decarboxylase proenzyme OS=Xenopus laevis GN=amd1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.395e-23
Identity = 72/193 (37.31%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSL--SVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFE 567
            S+FV   + I+KTCGTT LL ++  +L+LA        +++  Y+R +F+    Q +PHR+F EEV  L+  F     +  A+ MG   N+  W++Y+        ++ P  TLE+ M+ LD +    FY     +A  +T  SGIR ++  S I    F PCGYSMN ++ D    TIH+TPE  FSY SFE
Sbjct:   71 SMFVSKRRFILKTCGTTLLLQALVPLLELAREYCGFDGIQNFFYSRKNFMKPNHQEYPHRNFHEEVEFLNQIFP----NGAAYCMGRI-NSDCWYLYTLDIPDEYVISQPDQTLEILMSELDPEVMDQFYMKEGVTANDVTRVSGIRDLITGSVIDATMFSPCGYSMNGMKSDGTYWTIHITPEPDFSYVSFE 258          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_SCHPO (S-adenosylmethionine decarboxylase proenzyme OS=Schizosaccharomyces pombe GN=spe2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.353e-23
Identity = 76/222 (34.23%), Postives = 116/222 (52.25%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSLSVRSVR--YTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVNPVY-----TLEMCMTGLDRKRASVFY------------------KTNESSAAMM----TEDSGIRKILPKSE----ICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFE 567
            S+FV+ +K+I+KTCGTT LL S+P +L++A S+    R +R  Y+R +F++   Q  PH S+ EEV  L   F        ++V+G P N   WH++S  A   S +         TLE+ MT +  +R+  FY                  K N S   ++     ++SG+R +   S+    +  F+F+P G+S N I  D  +TIHVTP++  SYASFE
Sbjct:   86 SMFVFAHKIILKTCGTTTLLASLPRLLEIASSVGFD-RPLRIFYSRKNFLYPERQLAPHTSWEEEVRYLQLFFPS----GCSYVVG-PTNKNHWHLFSDLADDYSLLEDSLDPEDETLEVLMTDMSPERSLQFYAPSLDVVRSARGDDYVREKNNLSGGHILGSYVADESGVRDLCSTSDKKAVLDAFQFEPIGFSSNMIYKDRYATIHVTPQEHCSYASFE 301          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_TRYBB (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.880e-20
Identity = 73/233 (31.33%), Postives = 110/233 (47.21%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAQAGSHVNPVYTLEMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPKSEIC-DFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFE----AVGYDF*GCEVDSLA*EGALLASNPLSFSVALHSD 672
            SLFV   +VI+ TCGT  LL  +P I +   ++   V  V +   ++ F   Q  PH S +EE   L  HF         F+ G P ++  + +Y  S       +    L M M GLDR +   +Y           A++ E +G+ +++  S I  D +++PCGYS+N+I G    TIH+TPE+  S+AS+E    A+ Y    C        G L   +P  FSV +  D
Sbjct:   87 SLFVMKDRVILITCGTITLLNCVPLICEAVSTVCGEVEWVSFMHKNYSFPWEQKGPHLSMAEEFKTLRSHFPS----GQPFIFG-PIDSDHYFLYLDSDVVQPSCSDDAQLSMTMYGLDRNQTKHWYSDKMLPTGPETAVIREATGLSEVVDDSWILHDLQYEPCGYSINAIRGSEYQTIHITPEEHCSFASYETNTCALNYSKCIC--------GVLRVFDPERFSVIVFID 306          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_TRYCR (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.781e-18
Identity = 65/197 (32.99%), Postives = 94/197 (47.72%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRW-HVYSASAQAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICD-------FEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFE 567
            SLFV   ++I+ TCGTT LL ++P +L     +   V  V +   ++ F   Q  PH S +EE   L  +F         F+ G  D+   +  VY    +     N    L M M GLDR +   ++     S    TE + IRK     ++ D        +F+PCGYS+N+I G    TIH+TPED  S+AS+E
Sbjct:   87 SLFVMRDRIILITCGTTTLLNAVPFVLDAVSDVRGEVEWVSFMHKNYSFPWEQKGPHLSMAEEFNTLRTYFPS----GKPFIFGPVDSDHYFLFVYDDVIRPCETENDTQ-LSMTMYGLDRTQTKHWFSDRFISTG--TETAAIRKATKLDKVADDSWKLHDLQFEPCGYSINTIRGAEYQTIHITPEDHCSFASYE 276          
BLAST of EY753954 vs. ExPASy Swiss-Prot
Match: DCAM_LEIIN (S-adenosylmethionine decarboxylase proenzyme OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 67/200 (33.50%), Postives = 104/200 (52.00%), Query Frame = 1
Query:    1 SLFVYPYKVIIKTCGTTKLLLSIPAILKLAESLSLSVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHF--GK---FG-MDSTAFVMGSPDNTKRWHVYSASAQAGSHVNPVYTLEMCMTGLDRKR-----ASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFE 567
            SLFV   ++I+ TCGTT LL SIP IL+   ++   +  V +   ++ F   Q  PH S ++E A L  HF  GK   FG +DS  + +   D+  R      S++  +       L M M GLD+++     +  F  T+  +AA+       R +     + D +F+PCGYS+N+I  +   T+H+TPED  S+AS+E
Sbjct:  101 SLFVMKNRIILITCGTTTLLNSIPNILEAISAVRGELEWVSFMHKNYSFPWMQKGPHTSLADEFATLKQHFPTGKPYIFGPVDSDHYFLFCYDDIIR----PCSSEDDTQ------LSMTMYGLDKEQTKHWFSDRFISTSAETAAIRAATHLDRVVDGTWTLHDLQFEPCGYSINAIRDEEYQTMHITPEDHCSFASYE 290          
The following BLAST results are available for this feature:
BLAST of EY753954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DCAM1_MOUSE9.535e-2739.38S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_DROME1.626e-2639.41S-adenosylmethionine decarboxylase proenzyme OS=Dr... [more]
DCAM2_MUSSP2.124e-2639.38S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM2_MOUSE2.124e-2639.38S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_ONCVO1.798e-2537.25S-adenosylmethionine decarboxylase proenzyme OS=On... [more]
DCAM_XENLA6.395e-2337.31S-adenosylmethionine decarboxylase proenzyme OS=Xe... [more]
DCAM_SCHPO8.353e-2334.23S-adenosylmethionine decarboxylase proenzyme OS=Sc... [more]
DCAM_TRYBB3.880e-2031.33S-adenosylmethionine decarboxylase proenzyme OS=Tr... [more]
DCAM_TRYCR2.781e-1832.99S-adenosylmethionine decarboxylase proenzyme OS=Tr... [more]
DCAM_LEIIN4.743e-1833.50S-adenosylmethionine decarboxylase proenzyme OS=Le... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753954 ID=EY753954; Name=EY753954; organism=Citrus sinensis; type=EST; length=889bp
AGCCTCTTTGTGTACCCTTACAAAGTTATTATCAAAACTTGTGGGACTAC
CAAGCTGCTTCTTTCAATCCCTGCCATCCTCAAGTTAGCTGAGTCCCTCT
CGTTGTCTGTTCGATCTGTGAGATACACTCGTGGAAGCTTCATATTTGCT
GGGGCTCAGCCATTTCCACACCGTAGCTTCTCTGAGGAAGTAGCTGTCCT
TGATGGACACTTTGGCAAGTTTGGTATGGACAGCACAGCTTTTGTCATGG
GTAGTCCTGACAACACAAAGAGATGGCATGTTTACTCTGCCTCTGCTCAA
GCAGGAAGCCATGTAAACCCAGTTTACACTCTAGAGATGTGCATGACTGG
TTTGGACAGAAAGAGGGCATCTGTCTTCTACAAAACTAATGAAAGCTCAG
CCGCTATGATGACCGAGGACTCTGGCATCAGAAAGATTCTTCCAAAATCT
GAGATTTGTGATTTTGAGTTTGACCCTTGTGGTTACTCCATGAATAGTAT
TGAAGGGGATGCAGTATCTACTATCCACGTCACACCTGAAGATGGTTTCA
GTTATGCAAGTTTTGAGGCTGTGGGTTATGATTTTTGAGGTTGTGAAGTT
GACTCCCTTGCTTGAGAGGGTGCCTTGCTTGCTTCAAACCCGCTGAGTTT
TTCTGTTGCTCTGCATTCTGACTTTGTTGGGGATGAACATGGAGACCCCT
TCATGCTGGACTTGGAGGTATATTCCTGGGGAGAAAAGATTTTGAAGAGC
CTGGGAATATGGGTCGCTGATCACTTCAGCTTTCGGGGGCGGATGGTCCC
ATTTCCTAGGCAATTTGAAAGGCTGTGGAGCGCGGCCCAAAGGCCAAGAA
ATTTAGAGGAAAGTGGCCCGAAAAAAATGCGAGTGGTTT
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