GE213205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.952e-16 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = -1 Query: 138 LAWSRPRCGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 374 ++++R P CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 40 ISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.300e-15 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = -1 Query: 141 CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 332 CC G++SLN+AA + DR+TAC CLK AA SI +N AA LP CGVS+PY IS +T+C+ + Sbjct: 53 CCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.698e-15 Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = -1 Query: 138 PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 347 P P C G+RSL +AAR DRQ AC C+K A I +N AAGLPG C V IPYKIS S DC +V+ Sbjct: 51 PAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.217e-15 Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = -1 Query: 138 RCGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPS-LNLNNAAGLPGACGVSIPYKISTSTDCSKVR 356 R G IP CC+GV+ LN+ ARTT DRQ AC C++ AAR++ S LN AA LPGAC V I Y IS T+C+ VR Sbjct: 45 RGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.896e-15 Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = -1 Query: 141 GPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 350 GP P CC+GV++L+ AR+ DRQ+ACNCLK AR I +LN +NA +P CGV++PY IS + DCS+V Sbjct: 43 GPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = -1 Query: 138 PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 347 P P CC GVRSL AAA+T DR+ ACNC+K AA+ SLN AA L CGV + Y +S + +C+ V+ Sbjct: 25 PPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.217e-13 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = -1 Query: 138 PIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 347 P P CC GVRSL AAA+T DR+ ACNC+K AA+ SLN AA L CGV + Y +S + +C+ V+ Sbjct: 25 PPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = -1 Query: 138 GPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAAR--SIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 350 G IP CCNG+R L+ A + D+Q C C+K S S+ L AA LPG CGV +PYKI ST+C+ ++ Sbjct: 44 GAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.710e-13 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = -1 Query: 138 GPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQA--ARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 350 GP+P CCNG+ +L + A+T+ DRQ C C+K A ++ + NA LP CGV +PYK S STDC ++ Sbjct: 41 GPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of GE213205 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.623e-13 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = -1 Query: 141 CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 332 CC+GV+ L AR+T D+Q C CLK A + N AAG+P CGVS+PY IS S DCSK+ Sbjct: 54 CCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114 The following BLAST results are available for this feature:
BLAST of GE213205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213205 ID=GE213205; Name=GE213205; organism=Citrus sinensis; type=EST; length=374bpback to top |