EY753868

Overview
NameEY753868
Unique NameEY753868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20
Identity = 59/161 (36.65%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  271 YTHKIINFKYNKDQIIHVNLTQD-----------GPKPLEVGRT----LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            +T++++ F+     I   +L  D              P E+  T    L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTL  D A Y               EESGWKL HGDVF PP+  ++LS ++ +G Q
Sbjct:  200 HTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQ 353          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query:  370 LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTL  D A Y               EESGWKL HGDVF PP+  ++LS ++ +G Q
Sbjct:  249 LYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQ 354          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query:  370 LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTL  D A Y               EESGWKL HGDVF PP+  ++LS ++ +G Q
Sbjct:  249 LYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQ 354          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.104e-19
Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 1
Query:  370 LDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            L  TYSV W  +++ +A R+D YL     + QIHWFSI NS ++V FL+G++SMI++RTL  D A Y               EESGWKL HGDVF PP+  ++LS ++ +G Q
Sbjct:  248 LYFTYSVHWEESDIKWASRWDTYLTMS--DVQIHWFSIINSVVVVFFLSGILSMIIIRTLRKDIANY-----NKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQ 353          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.459e-19
Identity = 78/284 (27.46%), Postives = 117/284 (41.20%), Query Frame = 1
Query:   22 TRPLGEFLGGNELIASQIDIKFQRNVDKASI-----CSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSD-------NGKHVLYTHKIINFKYNKDQIIHVNLTQD--------------------------GPKPLEVGRTLDM-----------------TYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            T  LGE L G+ +  S     F  +  K  +     CS  + +  +K  +D I+N Y   + LD LP+    G L  D   D        G+ V    K +N         H N T +                          G    + G   +                  TY VK+TP+ V + +R+D+Y +    ++ +HWFSI NS M+V  LT +V+MI++RTL  D  +Y               EE+GWK+ HGDVF PP + ++LS  + +G Q
Sbjct:   76 TENLGEILLGDRIENSDYTFNFLTDGGKCKVINSESCSPIIKKEDLKVLEDRIQNQYRVHWLLDGLPVRQ-TGRLASDPGFDLGFMTLAEGQTVATAEKYLNNHLEITIFYHSNPTDNTSRIVGFEIFPTSRQYKKVENWKGDTGDDCPQYGENFEQLSVSVKEGEDQERFVLWTYEVKYTPSPVLWNKRWDIYFESN--DNSVHWFSILNSLMIVFILTVMVAMIIIRTLKKDIRRYTSIDTSEDRDS---QEETGWKMIHGDVFRPPSHPMLLSVCIGSGVQ 353          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  379 TYSVKWTPT-NVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            TYS+ +    N+ +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKL HGD+F PPR  ++LS  + +G Q
Sbjct:  270 TYSISFEEEKNIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQ 374          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  379 TYSVKWTPT-NVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            TYS+ +    N+ +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKL HGD+F PPR  ++LS  + +G Q
Sbjct:  269 TYSISFEEEKNIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQ 373          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 79/291 (27.15%), Postives = 128/291 (43.99%), Query Frame = 1
Query:   16 RPTRPLGEFLGGNELIASQIDIKFQRNVDKASICSLDL------DEAKVKQFKDAIENNYWFEFFLDDLPL-W-------------GF-VGDLHPDK---------NSDNGK--------HV---LYTH---------KIINFKYNKDQIIHVNLTQ---DGPKPLEVGRT------LDMTYSVKWTPTN-VTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            RP+  LG+ L G  +  S     F +      +C+         D+ K++  K ++  NY   + +D++P+ W             GF +G    DK         NS+  +        HV   +Y H         +++  K       H ++ +    GP P+++         +  TYSV +     + +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKL HGD+F PPR  ++LS  + +G Q
Sbjct:   91 RPSENLGQVLFGERIEPSPYKFTFNKEETCKLVCTKTYHTEKAEDKQKLEFLKKSMLLNYQHHWIVDNMPVTWCYDVEDGQRFCNPGFPIGCYITDKGHAKDACVINSEFHERDTFYIFNHVDIKIYYHVVETGSMGARLVAAKLEPKSFKHTHIDKPDCSGP-PMDISNKASGEIKIAYTYSVSFEEDKKIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQ 374          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  379 TYSVKWTPTN-VTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            TYSV +   + + +A R+D  L+     H I WFSI NS ++V+FL+G+V+MI++RTL  D A+Y               EE GWKL HGD+F PPR  ++LS  + +G Q
Sbjct:  270 TYSVSFEEDDKIRWASRWDYILESMPHTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARY-----NQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQ 374          
BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TMN2_YEAST (Transmembrane 9 superfamily member 2 OS=Saccharomyces cerevisiae GN=TMN2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.544e-13
Identity = 47/125 (37.60%), Postives = 68/125 (54.40%), Query Frame = 1
Query:  346 KPLEVGRTLD----MTYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            KPL +    D     TYSVK+  ++  +A R+D YL    ++ QI WFS+ N  ++VI L+ +V   L+R L +D A+Y               E+SGWKL HGDVF  P   ++LS +V +G Q
Sbjct:  266 KPLILDEDKDNEVYFTYSVKFVASDTVWATRWDKYLH--IYDPQIQWFSLINFSVIVILLSSVVMHSLLRALKSDLARY-----NELNLDNEFHEDSGWKLGHGDVFRTPSKSMLLSILVGSGMQ 383          
The following BLAST results are available for this feature:
BLAST of EY753868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TM9S4_HUMAN8.452e-2036.65Transmembrane 9 superfamily member 4 OS=Homo sapie... [more]
TM9S4_RAT1.104e-1945.13Transmembrane 9 superfamily member 4 OS=Rattus nor... [more]
TM9S4_MOUSE1.104e-1945.13Transmembrane 9 superfamily member 4 OS=Mus muscul... [more]
TM9S4_BOVIN1.104e-1945.13Transmembrane 9 superfamily member 4 OS=Bos taurus... [more]
PHG1A_DICDI2.459e-1927.46Putative phagocytic receptor 1a OS=Dictyostelium d... [more]
TM9S2_RAT1.263e-1541.44Transmembrane 9 superfamily member 2 OS=Rattus nor... [more]
TM9S2_MOUSE1.263e-1541.44Transmembrane 9 superfamily member 2 OS=Mus muscul... [more]
TM9S2_PONAB3.675e-1527.15Transmembrane 9 superfamily member 2 OS=Pongo abel... [more]
TM9S2_HUMAN3.675e-1541.44Transmembrane 9 superfamily member 2 OS=Homo sapie... [more]
TMN2_YEAST1.544e-1337.60Transmembrane 9 superfamily member 2 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-H02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753868 ID=EY753868; Name=EY753868; organism=Citrus sinensis; type=EST; length=876bp
CCGGNATTCAAAGCTCGACCCACGCGTCCGCTTGGTGAGTTCCTGGGTGG
AAATGAACTTATTGCCAGTCAAATAGACATAAAGTTCCAAAGGAATGTTG
ACAAAGCCTCCATCTGTTCATTGGATCTTGATGAGGCAAAGGTCAAACAA
TTCAAAGATGCAATTGAGAACAATTATTGGTTTGAATTCTTCTTGGATGA
TCTGCCTTTATGGGGCTTTGTTGGTGATCTGCATCCTGATAAGAACAGTG
ATAATGGGAAGCACGTCCTCTACACACACAAGATTATAAATTTTAAATAC
AATAAAGATCAGATTATTCATGTTAATCTCACTCAAGACGGCCCAAAGCC
TCTGGAAGTTGGGAGGACACTGGACATGACATACTCAGTCAAATGGACTC
CAACTAATGTCACTTTTGCGCGTCGTTTTGATGTATATTTGGACTACCCT
TTCTTTGAGCACCAGATCCATTGGTTCTCCATTTTCAATTCTTTCATGAT
GGTTATCTTCCTCACTGGTTTGGTATCAATGATATTGATGCGGACTCTTA
NAAATGATTATGCCAAGTATGCACGGGAAGATGATGATCTANAGACTTTG
GAAAGAGATGTGAGTGAGGAATCTGGTTGGAAACTTTGTCATGGGGATGT
TTTTCCGCCTCCTCGTAATTTGGTTGTCCTTTCANCTGTTGTAAGCACTG
GTGCACAGCTTGCATTGCTCGTTCTACTCCGTATTCTGATGGCAATTGTG
GAAACTTTGTTATTGGGGAGAGGAGCCATTGGGACTACTTTTATAAAAGG
NATGCCTCTAACTCTTCATTTCTGGNTTTGGGAGGGGGGGGAAGTCCTCA
CCCAAGGGGGGCAAAACGGGTAAAAT
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