EY753868

Overview
NameEY753868
Unique NameEY753868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753868 vs. ExPASy Swiss-Prot
Match: TMN1_YEAST (Transmembrane 9 superfamily member 1 OS=Saccharomyces cerevisiae GN=EMP70 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 45/128 (35.16%), Postives = 69/128 (53.91%), Query Frame = 1 
Query:  331 TQDGPKPLEVGRTLDM--TYSVKWTPTNVTFARRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTLXNDYAKYAXXXXXXXXXXXXVSEESGWKLCHGDVFPPPRNLVVLSXVVSTGAQ 708
            T   P  L+ G   ++  TYSVK+  +  ++A R+D YL    ++  I WFS+ N  ++V+ L+ +V   L+R L +D+A+Y               E+SGWKL HGDVF  P   + LS +V +G Q
Sbjct:  258 TTGSPLMLDEGNDNEVYFTYSVKFNESATSWATRWDKYLHV--YDPSIQWFSLINFSLVVVLLSSVVIHSLLRALKSDFARY-----NELNLDDDFQEDSGWKLNHGDVFRSPSQSLTLSILVGSGVQ 378
The following BLAST results are available for this feature:
BLAST of EY753868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TMN1_YEAST3.439e-1335.16Transmembrane 9 superfamily member 1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-H02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753868 ID=EY753868; Name=EY753868; organism=Citrus sinensis; type=EST; length=876bp
CCGGNATTCAAAGCTCGACCCACGCGTCCGCTTGGTGAGTTCCTGGGTGG
AAATGAACTTATTGCCAGTCAAATAGACATAAAGTTCCAAAGGAATGTTG
ACAAAGCCTCCATCTGTTCATTGGATCTTGATGAGGCAAAGGTCAAACAA
TTCAAAGATGCAATTGAGAACAATTATTGGTTTGAATTCTTCTTGGATGA
TCTGCCTTTATGGGGCTTTGTTGGTGATCTGCATCCTGATAAGAACAGTG
ATAATGGGAAGCACGTCCTCTACACACACAAGATTATAAATTTTAAATAC
AATAAAGATCAGATTATTCATGTTAATCTCACTCAAGACGGCCCAAAGCC
TCTGGAAGTTGGGAGGACACTGGACATGACATACTCAGTCAAATGGACTC
CAACTAATGTCACTTTTGCGCGTCGTTTTGATGTATATTTGGACTACCCT
TTCTTTGAGCACCAGATCCATTGGTTCTCCATTTTCAATTCTTTCATGAT
GGTTATCTTCCTCACTGGTTTGGTATCAATGATATTGATGCGGACTCTTA
NAAATGATTATGCCAAGTATGCACGGGAAGATGATGATCTANAGACTTTG
GAAAGAGATGTGAGTGAGGAATCTGGTTGGAAACTTTGTCATGGGGATGT
TTTTCCGCCTCCTCGTAATTTGGTTGTCCTTTCANCTGTTGTAAGCACTG
GTGCACAGCTTGCATTGCTCGTTCTACTCCGTATTCTGATGGCAATTGTG
GAAACTTTGTTATTGGGGAGAGGAGCCATTGGGACTACTTTTATAAAAGG
NATGCCTCTAACTCTTCATTTCTGGNTTTGGGAGGGGGGGGAAGTCCTCA
CCCAAGGGGGGCAAAACGGGTAAAAT
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