EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECO27 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 75/174 (43.10%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +   +I + + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHD-SRSIQAAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHISS (Glycine dehydrogenase [decarboxylating] OS=Shigella sonnei (strain Ss046) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHIDS (Glycine dehydrogenase [decarboxylating] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHIBS (Glycine dehydrogenase [decarboxylating] OS=Shigella boydii serotype 4 (strain Sb227) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECOLC (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECOHS (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O9:H4 (strain HS) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECO7I (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECO5E (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECO57 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O157:H7 GN=gcvP PE=3 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 6.490e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531
[Close]
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHEPA (Glycine dehydrogenase [decarboxylating] OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.476e-31
Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 1 
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R+H L    A  L   G VE+    +FDT+ +K  D  A+ + A    +NLR+     +  S  ETTT  DV +LF V  G   G+      A++     ++IPS L R+   LTHP FN+Y +E E++RYI  L++K+L+L HSMI LGSCTMKLNA   M P+TWP F
Sbjct:  360 IAERIHRLTDIVAAALTAKG-VELVNNTWFDTLSIKGLDVTAVQARALATGLNLRIDSDGVIGVSLSETTTRSDVAELFDVLLGEGHGQDAAALDAAIIANGSSSIPSELVRKDAILTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMAPITWPEF 531
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_ECO274.969e-3143.10Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_SHISS6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Shigell... [more]
GCSP_SHIDS6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Shigell... [more]
GCSP_SHIBS6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Shigell... [more]
GCSP_ECOLC6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECOHS6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO7I6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO5E6.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO576.490e-3143.68Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_SHEPA8.476e-3142.77Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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