EY753660

Overview
NameEY753660
Unique NameEY753660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUS (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon solidaginis GN=leuB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = 3
Query:   18 CAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 278
            CA + G +G+ PS ++ E    L E   GSAPDI GKN+ANP A +LS   ++R+ + L   AD+I  +++S + +G YRTAD+  +S
Sbjct:  257 CAMITGSIGMLPSASLNEKKFGLYEPAGGSAPDIEGKNIANPIAQILSVSMLVRYSMNLKTIADKIDQSVISVLKKG-YRTADISNNS 343          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BUCBP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=leuB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 39/84 (46.43%), Postives = 53/84 (63.10%), Query Frame = 3
Query:   18 CAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            CA + G +GL PS ++ +    L E   GSAPDI GKN+ANP AL+LS   M+R+  +L+D AD I  A+  T+  G YRT D+
Sbjct:  257 CAAITGSIGLLPSASLNDKNFGLYEPAGGSAPDIKGKNIANPIALILSIGMMMRYSFKLYDVADLIDWAVNKTLKLG-YRTQDI 339          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BACLD (3-isopropylmalate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=leuB PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSS---TTSDFT 296
            L G LG+ PS ++   G+ L E VHGSAPDIAG+N+ANP A +LS+  MLR    L  +A  +++A+   +  GK RT DL   S   TT   T
Sbjct:  257 LTGSLGMLPSASLSSSGLHLYEPVHGSAPDIAGQNIANPLAAILSAAMMLRTSFGLEAEAQAVEHAVDQVLRAGK-RTKDLAKGSEHCTTQSIT 349          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_ANASP (3-isopropylmalate dehydrogenase OS=Anabaena sp. (strain PCC 7120) GN=leuB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            A L G +G+ PS ++G  G  + E VHGSAPDIAG++ ANP A +LS+  MLR+ L+    AD+I+ A+L  + +G  RT D+
Sbjct:  257 AMLTGSIGMLPSASLGASGPGVFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYALDQPQAADKIEQAVLQVLEQGD-RTGDI 338          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH_RICBR (Isocitrate dehydrogenase [NADP] OS=Rickettsia bellii (strain RML369-C) GN=icd PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADL 266
            + A + G +GL  S NIGE   A+ EAVHGSAPDIAG+++ANP+ LL +++ ML H+   D A  I+NA   TI +G + TAD+
Sbjct:  237 VAAEISGSVGLAGSANIGEH-YAMFEAVHGSAPDIAGQDIANPSGLLNAAIMMLVHIGQGDIATLIENAWKKTIEDGMH-TADI 318          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: TTUC3_AGRVI (Probable tartrate dehydrogenase/decarboxylase ttuC' OS=Agrobacterium vitis GN=ttuC' PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 311
            L   L G LG+ P+ NI       ++ E +HGSA DI GK +ANP A   ++  ML HL   D A R+ +A+   + E    T D+GG++ TS  T+A+C+
Sbjct:  251 LAGALAGSLGVAPTANIDPERRFPSMFEPIHGSAFDITGKGIANPIATFWTAAQMLEHLGERDAAARLMSAV-ERVTEAGILTPDVGGTANTSQVTEAVCN 350          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_SYNP6 (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=leuB PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            + A L G +G+ PS ++G  G  + E VHGSAPDIAG++ ANP A +LS+  MLR+ L+  + A RI+ A+   + +G YRT DL     T    K + D L
Sbjct:  255 IAAMLTGSIGMLPSASLGAEGPGVFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYGLDEPEAAARIEAAVNQVLDQG-YRTGDLYSEGMTLVGCKGMGDAL 355          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_SYNE7 (3-isopropylmalate dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=leuB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            + A L G +G+ PS ++G  G  + E VHGSAPDIAG++ ANP A +LS+  MLR+ L+  + A RI+ A+   + +G YRT DL     T    K + D L
Sbjct:  255 IAAMLTGSIGMLPSASLGAEGPGVFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYGLDEPEAAARIEAAVNQVLDQG-YRTGDLYSEGMTLVGCKGMGDAL 355          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAHJ (3-isopropylmalate dehydrogenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=leuB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSD 290
            G LGL+PS +    G  L E +HGSAPDIA +NLANP  ++LS    LR      D A  ++ A+   I +GK  T DL G  TTSD
Sbjct:  252 GSLGLSPSASFSLEGPRLYEPIHGSAPDIANQNLANPFGMILSLAMCLRESFNFEDAASELEQAVYQLIKDGK-TTKDLNGHYTTSD 337          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BURPS (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei GN=leuB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.664e-12
Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 311
            L G +G+ PS ++ +    L E  HGSAPDIAGK +ANP A +LS+  +LR+ L   ++ADRI+ A+ + + +G YRT D+         T A+ D
Sbjct:  255 LTGSIGMLPSASLDQRNKGLYEPSHGSAPDIAGKGIANPLATILSAAMLLRYSLNRAEQADRIERAVKAVLEQG-YRTGDIATPGCKQVGTAAMGD 349          
The following BLAST results are available for this feature:
BLAST of EY753660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
LEU3_BUCUS4.337e-1242.053-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
LEU3_BUCBP4.337e-1246.433-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
LEU3_BACLD4.337e-1244.683-isopropylmalate dehydrogenase OS=Bacillus lichen... [more]
LEU3_ANASP4.337e-1245.783-isopropylmalate dehydrogenase OS=Anabaena sp. (s... [more]
IDH_RICBR4.337e-1248.81Isocitrate dehydrogenase [NADP] OS=Rickettsia bell... [more]
TTUC3_AGRVI5.664e-1238.61Probable tartrate dehydrogenase/decarboxylase ttuC... [more]
LEU3_SYNP65.664e-1242.163-isopropylmalate dehydrogenase OS=Synechococcus s... [more]
LEU3_SYNE75.664e-1242.163-isopropylmalate dehydrogenase OS=Synechococcus e... [more]
LEU3_STAHJ5.664e-1245.983-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_BURPS5.664e-1240.633-isopropylmalate dehydrogenase OS=Burkholderia ps... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753660 ID=EY753660; Name=EY753660; organism=Citrus sinensis; type=EST; length=532bp
CATCATTAGTGTACCTATGTGCTGGGTTGATTGGTGGATTGGGCTTAACA
CCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTGCTGAAGCTGTTCA
TGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTT
TGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGAGCTCCATGACAAG
GCTGATAGGATCCAAAATGCTATCCTGAGCACAATTGCAGAGGGGAAGTA
TCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCAGATTTCACAAAGG
CAATCTGCGATCATCTTTAAATATTTCTTTCTACATAGAATTTGAATTCA
TGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGCAATGTCTCAAATT
TGTTTTTTCCCCCCCTTTTTAAAGTGTTTTTCTTTGAGGGGAATGAGACC
CATCACCTTGGTGACTATGTAGAAGTTTTTTTCTGATGAAACTGTTCAGC
CAGAGTGTATATGGCCGTCCTCNNGANAAAAA
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