EY753660

Overview
NameEY753660
Unique NameEY753660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_RHOBA (3-isopropylmalate dehydrogenase OS=Rhodopirellula baltica GN=leuB PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 7.148e-15
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            L G LG+ PS ++G+GG  L E +HGSAPDIAGK++ANP A +L++  MLRH L L D+A+ I+ A+   I +G  RT DL
Sbjct:  256 LPGSLGMLPSASLGDGGPGLYEPIHGSAPDIAGKSVANPLATILAAAMMLRHSLGLTDEAEAIEKAVAGVITDG-LRTPDL 335          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH1_SCHPO (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Schizosaccharomyces pombe GN=idh1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.336e-15
Identity = 44/99 (44.44%), Postives = 54/99 (54.55%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            + L+GG G+ P  N G                I G+  ANPTA +LS+  MLRHL L D AD I  A  S I EGK  T DLGGS++T DFT AI + +
Sbjct:  255 SALVGGPGVIPGANFGRDYALFEPGCRHVGLSITGRGEANPTAAILSACLMLRHLGLKDYADLINAATYSVIEEGKTLTKDLGGSASTGDFTHAILERM 353          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 9.336e-15
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIAL---AEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 305
            AG+ GG G+ P  N+G         A A +     I  +N ANP ALLLSS  MLRHL+    ADR++ A+   IAEGK RT DLGG+STT +   A+
Sbjct:  265 AGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQEVVDAV 362          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_THET2 (3-isopropylmalate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=leuB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.219e-14
Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L + L G LGL PS ++G G   + E VHGSAPDIAGK LANPTA +LS+  ML H   L + A ++++A+   + E      DLGGS+ T  FT  +  HL
Sbjct:  246 LASVLPGSLGLLPSASLGRG-TPVFEPVHGSAPDIAGKGLANPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLEAP--PPDLGGSAGTEAFTATVLRHL 344          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_LISMO (3-isopropylmalate dehydrogenase OS=Listeria monocytogenes GN=leuB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.219e-14
Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 305
            + G LG+ PS +  E G +L E +HGSAPDIA +N+ANP +++ S   MLR    L  +AD I  A   T+  G + TADLGG++TT+DFT  +
Sbjct:  250 ITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAG-FLTADLGGNTTTTDFTNEV 342          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BACHK (3-isopropylmalate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=leuB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.219e-14
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L G LG+ PS +  E G +L E +HGSAPDIAGKN ANP A++ S   ML +   L  +   I+ AI + +  GK  TAD+GG+ TT+ FTKA+   +
Sbjct:  248 LAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TADIGGAETTTSFTKAVMQEM 344          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BACAN (3-isopropylmalate dehydrogenase OS=Bacillus anthracis GN=leuB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.219e-14
Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L G LG+ PS +  E G +L E +HGSAPDIAGKN ANP A++ S   ML +   L  +   I+ AI + +  GK  TAD+GG+ TT+ FTKA+   +
Sbjct:  248 LAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TADIGGTETTTSFTKAVMQEM 344          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LYS12_YEAST (Homoisocitrate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LYS12 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.592e-14
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            A L+G LG+ PS N+G   I + E  HGSAPDIAGK +ANP A + S+  ML  L  ++ A  I  A+ + + EG  +T DLGG ++T      +   L
Sbjct:  274 AALVGSLGVVPSANVGPE-IVIGEPCHGSAPDIAGKGIANPIATIRSTALMLEFLGHNEAAQDIYKAVDANLREGSIKTPDLGGKASTQQVVDDVLSRL 371          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_LISMF (3-isopropylmalate dehydrogenase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=leuB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.592e-14
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 305
            + G LG+ PS +  E G +L E +HGSAPDIA +N+ANP +++ S   MLR    L ++AD I  A   T+  G + TADLGG+++T+DFT  +
Sbjct:  250 ITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFEEADAIDAATARTMQAG-FLTADLGGNTSTTDFTNEV 342          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BACCR (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=leuB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.592e-14
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L G LG+ PS +  E G +L E +HGSAPDIAGKN ANP A++ S   ML +   L  +   I+ A+ + +  GK  TAD+GG+ TT+ FTKA+   +
Sbjct:  248 LAGSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGYAIEEAVSAVLKSGKC-TADIGGTETTTSFTKAVIQEM 344          
The following BLAST results are available for this feature:
BLAST of EY753660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
LEU3_RHOBA7.148e-1551.853-isopropylmalate dehydrogenase OS=Rhodopirellula ... [more]
IDH1_SCHPO9.336e-1544.44Isocitrate dehydrogenase [NAD] subunit 1, mitochon... [more]
IDH1_ARATH9.336e-1545.92Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
LEU3_THET21.219e-1446.083-isopropylmalate dehydrogenase OS=Thermus thermop... [more]
LEU3_LISMO1.219e-1445.743-isopropylmalate dehydrogenase OS=Listeria monocy... [more]
LEU3_BACHK1.219e-1445.923-isopropylmalate dehydrogenase OS=Bacillus thurin... [more]
LEU3_BACAN1.219e-1445.923-isopropylmalate dehydrogenase OS=Bacillus anthra... [more]
LYS12_YEAST1.592e-1441.41Homoisocitrate dehydrogenase, mitochondrial OS=Sac... [more]
LEU3_LISMF1.592e-1444.683-isopropylmalate dehydrogenase OS=Listeria monocy... [more]
LEU3_BACCR1.592e-1444.903-isopropylmalate dehydrogenase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753660 ID=EY753660; Name=EY753660; organism=Citrus sinensis; type=EST; length=532bp
CATCATTAGTGTACCTATGTGCTGGGTTGATTGGTGGATTGGGCTTAACA
CCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTGCTGAAGCTGTTCA
TGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTT
TGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGAGCTCCATGACAAG
GCTGATAGGATCCAAAATGCTATCCTGAGCACAATTGCAGAGGGGAAGTA
TCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCAGATTTCACAAAGG
CAATCTGCGATCATCTTTAAATATTTCTTTCTACATAGAATTTGAATTCA
TGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGCAATGTCTCAAATT
TGTTTTTTCCCCCCCTTTTTAAAGTGTTTTTCTTTGAGGGGAATGAGACC
CATCACCTTGGTGACTATGTAGAAGTTTTTTTCTGATGAAACTGTTCAGC
CAGAGTGTATATGGCCGTCCTCNNGANAAAAA
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