EY753660

Overview
NameEY753660
Unique NameEY753660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STRT1 (3-isopropylmalate dehydrogenase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=leuB PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.032e-13
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L G LG+ PS +  E G +L E +HGSAPDIAG+ +ANP +++LS   MLR      + A+ I+NA+  T+ +G   T DLGG ++T++ T AI  +L
Sbjct:  249 LPGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVAMMLRESFNETEGAELIENAVDKTLNQG-ILTRDLGGQASTAEMTAAIISNL 345          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_RALME (3-isopropylmalate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=leuB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.032e-13
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            A L G +G+ PS ++      L E  HGSAPDIAGK +ANP A +LS+  MLR+ L   ++ADRI+NA+   +A+G YRTAD+
Sbjct:  253 AMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNRAEQADRIENAVKKVLAQG-YRTADI 334          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_PROM9 (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus (strain MIT 9312) GN=leuB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.032e-13
Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSST 281
            L A L G +G+ PS ++   G  + E VHGSAPDIAGKN+ANP A+LLS+  ML+  L   + A  ++ A+   +AEG +RTADL   S+
Sbjct:  253 LAAMLTGSIGMLPSASLNNNGPGVFEPVHGSAPDIAGKNIANPIAMLLSASMMLKIGLNEEEAAKNLETAVDKVLAEG-FRTADLADGSS 341          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_NOVAD (3-isopropylmalate dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=leuB PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.032e-13
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 3
Query:   30 IGGLGLTPSCNIGE-----GGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            +G +GL  S ++GE     G   L E +HGSAPDIAGK LANP A +LS+  +LRH L L   ADRI+ A+   +A+G     DLGG++ T++   A+   L
Sbjct:  252 VGSIGLLASASLGERETEYGTFGLYEPIHGSAPDIAGKGLANPMATILSAAMLLRHSLGLEVAADRIEAAVAKALADG-VLGRDLGGTAGTTEIGDAVLARL 352          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_THEEB (3-isopropylmalate dehydrogenase OS=Thermosynechococcus elongatus (strain BP-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.348e-13
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 284
            + A L G +G+ PS ++GE G AL E VHGSAPDIAG++ ANP A++LS+  MLR+ L     A  I+ AI + + +G YRT DL     T
Sbjct:  255 IAAMLTGSIGMLPSASLGESGPALFEPVHGSAPDIAGQDKANPLAMVLSAAMMLRYGLNQPAAAQAIEEAITAVLDQG-YRTGDLMSEGCT 344          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_HAEIN (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae GN=leuB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.348e-13
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 281
            A + G +G+ PS ++ E G  L E   GSAPDIAGK +ANP A +LS+  MLR+   L++ AD I++A+   +A G +RTADL   ST
Sbjct:  257 AMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASG-HRTADLADDST 343          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_SYNJA (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain JA-3-3Ab) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 284
            A L G +G+ PS ++G  G  + E VHGSAPDIAG++ ANP A +LS   +LR+ L+    ADRI+ A+ + +A+G YRTAD+     T
Sbjct:  263 AMLTGSIGMLPSASLGSSGPGVYEPVHGSAPDIAGQDKANPIAQVLSGAMLLRYSLDQPQAADRIEQAVEAVLAQG-YRTADIYSEGMT 350          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAAW (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAAS (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAAR (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
The following BLAST results are available for this feature:
BLAST of EY753660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
LEU3_STRT11.032e-1343.883-isopropylmalate dehydrogenase OS=Streptococcus t... [more]
LEU3_RALME1.032e-1349.403-isopropylmalate dehydrogenase OS=Ralstonia metal... [more]
LEU3_PROM91.032e-1346.673-isopropylmalate dehydrogenase OS=Prochlorococcus... [more]
LEU3_NOVAD1.032e-1344.123-isopropylmalate dehydrogenase OS=Novosphingobium... [more]
LEU3_THEEB1.348e-1347.253-isopropylmalate dehydrogenase OS=Thermosynechoco... [more]
LEU3_HAEIN1.348e-1346.593-isopropylmalate dehydrogenase OS=Haemophilus inf... [more]
LEU3_SYNJA1.761e-1346.073-isopropylmalate dehydrogenase OS=Synechococcus s... [more]
LEU3_STAAW1.761e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAS1.761e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAR1.761e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753660 ID=EY753660; Name=EY753660; organism=Citrus sinensis; type=EST; length=532bp
CATCATTAGTGTACCTATGTGCTGGGTTGATTGGTGGATTGGGCTTAACA
CCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTGCTGAAGCTGTTCA
TGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTT
TGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGAGCTCCATGACAAG
GCTGATAGGATCCAAAATGCTATCCTGAGCACAATTGCAGAGGGGAAGTA
TCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCAGATTTCACAAAGG
CAATCTGCGATCATCTTTAAATATTTCTTTCTACATAGAATTTGAATTCA
TGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGCAATGTCTCAAATT
TGTTTTTTCCCCCCCTTTTTAAAGTGTTTTTCTTTGAGGGGAATGAGACC
CATCACCTTGGTGACTATGTAGAAGTTTTTTTCTGATGAAACTGTTCAGC
CAGAGTGTATATGGCCGTCCTCNNGANAAAAA
back to top