EY753660

Overview
NameEY753660
Unique NameEY753660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAAN (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAAM (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAAB (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.761e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIENGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BORPE (3-isopropylmalate dehydrogenase OS=Bordetella pertussis GN=leuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 311
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L L  +ADR++ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BORPA (3-isopropylmalate dehydrogenase OS=Bordetella parapertussis GN=leuB PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 311
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L L  +ADR++ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_AQUAE (3-isopropylmalate dehydrogenase OS=Aquifex aeolicus GN=leuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKA-DRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            ++G LG+ PS +IG+   AL E VHGSAPDIAGK +ANP A +LS+  ML++    DKA D I+ AI  T+ +G YRT D+         TK I D +
Sbjct:  257 VVGSLGMLPSASIGDR-YALYEPVHGSAPDIAGKGIANPIATILSAAMMLKYSFNMDKAHDLIEKAIEETLNQG-YRTPDIYSEGCIKVGTKEITDKI 352          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU32_BORBR (3-isopropylmalate dehydrogenase 2 OS=Bordetella bronchiseptica GN=leuB2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICD 311
            A L G +G+ PS ++   G  L E  HGSAPDIAG+ +ANP A +LS+  +LR+ L L  +ADR++ A+   +A+G  RTAD+  + TT   T  + D
Sbjct:  255 AMLTGSIGMLPSASLNAAGQGLYEPSHGSAPDIAGQGIANPLATILSAAMLLRYSLNLAPQADRVEAAVRKVLADG-LRTADIHEAGTTKVSTSQMGD 351          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNL------ANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            AG+ GG G+ P  N+G      A    G++    GK+       ANP ALLLSS  MLRHL+    ADR++ A+   IAEG  RT DLGG+STT +   A+  +L
Sbjct:  265 AGIAGGTGVMPGGNVGA---EYAVFEQGASAGNVGKDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQEVVDAVIANL 366          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_RALEJ (3-isopropylmalate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            A L G +G+ PS ++      L E  HGSAPDIAGK +ANP A +LS+  MLR+ L   ++ADRI+NA+   +A+G YRT D+
Sbjct:  253 AMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGVANPLATILSAAMMLRYSLNKAEQADRIENAVKKVLAQG-YRTGDI 334          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_MANSM (3-isopropylmalate dehydrogenase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 281
            A + G +G+ PS ++ E G  L E   GSAPDIAGK +ANP A +LS+  MLR+   L++ A  I+NA+   +A+G +RT DL  +ST
Sbjct:  257 AMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAATAIENAVQKVLADG-HRTGDLADNST 343          
The following BLAST results are available for this feature:
BLAST of EY753660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
LEU3_STAAN1.761e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAM1.761e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAB1.761e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_BORPE2.300e-1342.863-isopropylmalate dehydrogenase OS=Bordetella pert... [more]
LEU3_BORPA2.300e-1342.863-isopropylmalate dehydrogenase OS=Bordetella para... [more]
LEU3_AQUAE2.300e-1346.943-isopropylmalate dehydrogenase OS=Aquifex aeolicu... [more]
LEU32_BORBR2.300e-1342.863-isopropylmalate dehydrogenase 2 OS=Bordetella br... [more]
IDH2_ARATH2.300e-1342.86Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
LEU3_RALEJ3.003e-1348.193-isopropylmalate dehydrogenase OS=Ralstonia eutro... [more]
LEU3_MANSM3.003e-1345.453-isopropylmalate dehydrogenase OS=Mannheimia succ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753660 ID=EY753660; Name=EY753660; organism=Citrus sinensis; type=EST; length=532bp
CATCATTAGTGTACCTATGTGCTGGGTTGATTGGTGGATTGGGCTTAACA
CCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTGCTGAAGCTGTTCA
TGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTT
TGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGAGCTCCATGACAAG
GCTGATAGGATCCAAAATGCTATCCTGAGCACAATTGCAGAGGGGAAGTA
TCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCAGATTTCACAAAGG
CAATCTGCGATCATCTTTAAATATTTCTTTCTACATAGAATTTGAATTCA
TGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGCAATGTCTCAAATT
TGTTTTTTCCCCCCCTTTTTAAAGTGTTTTTCTTTGAGGGGAATGAGACC
CATCACCTTGGTGACTATGTAGAAGTTTTTTTCTGATGAAACTGTTCAGC
CAGAGTGTATATGGCCGTCCTCNNGANAAAAA
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