EY753660

Overview
NameEY753660
Unique NameEY753660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_DESDG (3-isopropylmalate dehydrogenase OS=Desulfovibrio desulfuricans (strain G20) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            + G +G+ PS ++G GG  L E +HGSAPDIAG+N ANP A +LS+  MLRH   L  +A+ ++ A+   +  G YRT D+
Sbjct:  258 ITGSIGMLPSASLGAGGPGLFEPIHGSAPDIAGQNKANPLATILSTAMMLRHSFGLEKEAEAVEGAVQQVLKAG-YRTGDI 337          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUO (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon obscurum GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13
Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 3
Query:   18 CAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSS 278
            CA + G +G+ PS ++ E    L E   GSAPDIAGKN+ANP A +LS   ++R+ + L D AD+I  ++LS + +G YRTAD+  ++
Sbjct:  258 CAIITGSIGMLPSASLNEKKFGLYEPAGGSAPDIAGKNIANPIAQILSLSMLVRYGMNLKDIADKIDKSVLSVLKKG-YRTADISNNN 344          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.003e-13
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIG-EGGIALAEAVHGSAPD--IAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 305
            AG+ GG G+ P  N+G E  I    A  G+  +  +  +  ANP ALLLSS  MLRHL     ADR++ A+   I EGKYRT DLGG  TT +   A+
Sbjct:  266 AGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNDKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQEVVDAV 363          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: TTUC_BACSU (Probable tartrate dehydrogenase/decarboxylase OS=Bacillus subtilis GN=ycsA PE=3 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 3
Query:    6 LVYLCAGLIGGLGLTPSCNIGEGGI--ALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L  + + L+G +G+ PS NI   G   ++ E VHGSAPDIAG+ LANP   + ++  ML H    +   +I + +    A+G  +T D+GG STT++ T  IC  L
Sbjct:  247 LTDISSSLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAKLMLDHFGEEELGAKILDVMEQVTADG-IKTRDIGGQSTTAEVTDEICSRL 351          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_SYNY3 (3-isopropylmalate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   15 LCAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            + A L G +G+ PS ++G  G  L E VHGSAPDIAG++ ANP A +LS+  MLR+ L+    ADR+++A+   + +G YRT D+
Sbjct:  255 IAAMLTGSIGMLPSASLGSDGPGLFEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYGLDQPQAADRLEDAVKKVLEQG-YRTGDI 338          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STRR6 (3-isopropylmalate dehydrogenase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = 3
Query:   27 LIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLR-HLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            L G LG+ PS +  E G +L E +HGSAPDIAG+ +ANP +++LS V MLR     ++  +RI+ A+ +++A G   T D+GG ++T +  +AI   L
Sbjct:  249 LSGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVVMMLRDSFGRYEDTERIKRAVETSLAAG-ILTRDIGGQASTKEMMEAIIARL 345          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_STAS1 (3-isopropylmalate dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 3
Query:   33 GGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRHLELHDK-ADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 317
            G LGL+PS +  E G  L E +HGSAPDIA +++ANP  +LLS    LR     DK AD+++N I   I EGK  T DL G+  TS+    + ++L
Sbjct:  252 GSLGLSPSASFSEQGPRLYEPIHGSAPDIANQDIANPFGMLLSVAMCLRESLNEDKAADKLENVIYQLIKEGK-TTRDLNGNYLTSEIFNYVKENL 346          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_SODGM (3-isopropylmalate dehydrogenase OS=Sodalis glossinidius (strain morsitans) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 3
Query:   18 CAGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 281
            CA + G +G+ PS ++ E G  + E   GSAPDIAGK++ANP A +LS+  +LR+ L L D AD I+ A+   +  G +RTADL G  +
Sbjct:  258 CAMITGSMGMLPSASLNEQGFGMYEPAGGSAPDIAGKDIANPVAQILSASLLLRYSLGLDDAADAIELAVNQALEAG-HRTADLAGGGS 345          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_RALSO (3-isopropylmalate dehydrogenase OS=Ralstonia solanacearum GN=leuB PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADL 266
            A L G +G+ PS ++      L E  HGSAPDIAGK +ANP A +LS+  MLR+ L   ++ADRI+NA+   +A+G YRT D+
Sbjct:  254 AMLTGSIGMLPSASLDANNKGLYEPSHGSAPDIAGKGIANPLATILSAAMMLRYTLGKAEQADRIENAVKKVLAQG-YRTGDI 335          
BLAST of EY753660 vs. ExPASy Swiss-Prot
Match: LEU3_HAHCH (3-isopropylmalate dehydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.922e-13
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 3
Query:   21 AGLIGGLGLTPSCNIGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAI 305
            A L G +G+ PS ++   G  + E  HGSAPDIAG+N+ANP A +LS+  MLR+ L   D A  I+ A+   + +G  RT D+ GSS  S  T+A+
Sbjct:  255 AMLTGSIGMLPSASLNAAGKGMYEPCHGSAPDIAGQNMANPLATILSAAMMLRYSLAAEDAAAAIEQAVSDVLDQG-LRTRDIAGSSGESVSTQAM 349          
The following BLAST results are available for this feature:
BLAST of EY753660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
LEU3_DESDG3.003e-1345.683-isopropylmalate dehydrogenase OS=Desulfovibrio d... [more]
LEU3_BUCUO3.003e-1344.323-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
IDH3_ARATH3.003e-1344.90Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
TTUC_BACSU3.922e-1338.68Probable tartrate dehydrogenase/decarboxylase OS=B... [more]
LEU3_SYNY33.922e-1345.883-isopropylmalate dehydrogenase OS=Synechocystis s... [more]
LEU3_STRR63.922e-1341.843-isopropylmalate dehydrogenase OS=Streptococcus p... [more]
LEU3_STAS13.922e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_SODGM3.922e-1344.943-isopropylmalate dehydrogenase OS=Sodalis glossin... [more]
LEU3_RALSO3.922e-1348.193-isopropylmalate dehydrogenase OS=Ralstonia solan... [more]
LEU3_HAHCH3.922e-1343.753-isopropylmalate dehydrogenase OS=Hahella chejuen... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753660 ID=EY753660; Name=EY753660; organism=Citrus sinensis; type=EST; length=532bp
CATCATTAGTGTACCTATGTGCTGGGTTGATTGGTGGATTGGGCTTAACA
CCTAGTTGCAATATTGGGGAAGGAGGAATTGCCCTTGCTGAAGCTGTTCA
TGGTTCAGCACCTGATATTGCTGGAAAGAATTTGGCAAATCCAACTGCTT
TGCTGTTGAGTTCGGTAACAATGTTGCGCCATTTGGAGCTCCATGACAAG
GCTGATAGGATCCAAAATGCTATCCTGAGCACAATTGCAGAGGGGAAGTA
TCGAACTGCAGATCTTGGTGGCTCTTCAACGACATCAGATTTCACAAAGG
CAATCTGCGATCATCTTTAAATATTTCTTTCTACATAGAATTTGAATTCA
TGTTCAAGATTTACATTCTACCTTTCTTTTTTTGAGCAATGTCTCAAATT
TGTTTTTTCCCCCCCTTTTTAAAGTGTTTTTCTTTGAGGGGAATGAGACC
CATCACCTTGGTGACTATGTAGAAGTTTTTTTCTGATGAAACTGTTCAGC
CAGAGTGTATATGGCCGTCCTCNNGANAAAAA
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