EY753649

Overview
NameEY753649
Unique NameEY753649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.278e-64
Identity = 113/169 (66.86%), Postives = 146/169 (86.39%), Query Frame = 2
Query:  167 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIK 673
            +PEYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQIWDTAGQERF+TIT+SYYRGAHG+IIVYD+T  +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK FADE+ IP METSAK+ST +++AF+ +A+ IK
Sbjct:   27 HPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.302e-64
Identity = 121/204 (59.31%), Postives = 155/204 (75.98%), Query Frame = 2
Query:  155 STTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            +T     YD+L KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+  I+++ASD+VNK+L+GNKCD+T  KVV     K+ ADE GI F+ETSAK+S NVE+AF+ +A  IK RM   P   N    T+ I   P   K+ CC
Sbjct:    5 ATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTP---NDPDHTICI--TPNNKKNTCC 203          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.536e-64
Identity = 123/206 (59.71%), Postives = 154/206 (74.76%), Query Frame = 2
Query:  173 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK-----GXPVAXKSGCCST 772
            +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++ASDNVNK+LVGNK D+  +K  V     +A ADE GI F ETSAK + NVE+ F ++A  IK R+A   +   A+ S + IK     G   A KS CC +
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPS-ITIKPADQSGNQAAAKSACCGS 215          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.233e-62
Identity = 120/208 (57.69%), Postives = 151/208 (72.60%), Query Frame = 2
Query:  173 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK-------GXPVAXKSGCCST 772
            +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++ASDNVNK+LVGNK D+  +K  V     +A ADE GI F ETSAK + NVE+ F ++   IK R++   S   A  +T++I              KS CC T
Sbjct:   11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDS--RAEPATIKISQTDQAAGAGQATQKSACCGT 216          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.988e-61
Identity = 121/202 (59.90%), Postives = 151/202 (74.75%), Query Frame = 2
Query:  170 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRM----ASQPSMNNARASTVQIKGXPVAXKSG 760
            P+YD L KLLL+GDSGVGKSCLLLRF DD +  S+I+TIG+DFKI+ V+ DGK +KLQIWDTAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+  I+++ASDNVNK+LVGNK DL  +K VVS    +A ADE G  F ETSAKD+ +VE+AF+A+A  +  RM    A+Q  +   + S  Q    PV   SG
Sbjct:    8 PDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSAAQ----PVRLTSG 205          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.869e-61
Identity = 110/197 (55.84%), Postives = 151/197 (76.65%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXKSGCC 766
            YDYL KLLLIGDSGVGKSCLLLRF++DS+  S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++AS+NV K+L+GNKCD    + VS+E  +A ADE+G+ F+E SAK + NV++AF  +A  IK +     +  + +A+ V +       +  CC
Sbjct:    6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNVDLGNDRTVKR--CC 200          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.425e-59
Identity = 116/187 (62.03%), Postives = 150/187 (80.21%), Query Frame = 2
Query:  173 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQI 730
            EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D  TIKLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL  ++VVS + AK  A++  + ++E SAK  +NVE+AF  +A  +KD++   PS  NA ASTV +
Sbjct:    3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NAPASTVSL 187          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.058e-58
Identity = 106/193 (54.92%), Postives = 148/193 (76.68%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXP 742
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRTVE DGK IKLQIWDTAGQERFRTIT++YYRGA GI+ VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK S NVE+AF+ +A  I  ++  + + N+ + +  ++K  P
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKLKSPP 193          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.687e-58
Identity = 114/187 (60.96%), Postives = 148/187 (79.14%), Query Frame = 2
Query:  173 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQI 730
            EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D  TIKLQIWDTAGQERFRTITS+YYRGAHGII VYDVT++ SF+++ + WL +ID+YA+ NV KLL+GNK DL  ++VV  + AK  A++  + ++E SAK  +NVE+AF  +A  +KD++   PS  NA  STV +
Sbjct:    3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NAPTSTVNL 187          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.510e-58
Identity = 105/190 (55.26%), Postives = 147/190 (77.37%), Query Frame = 2
Query:  164 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIK 733
            M   YDYLFKLLLIGDSGVGK+CLL RF++D++  ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+  I+ +AS +V ++++GNKCD+   + VS E  +  A + GI F+ETSAK STNVE+AF  +A  I  ++  + + +N+  +   +K
Sbjct:    1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVK 190          
The following BLAST results are available for this feature:
BLAST of EY753649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB1C_DICDI3.278e-6466.86Ras-related protein Rab-1C OS=Dictyostelium discoi... [more]
RAB8B_DICDI7.302e-6459.31Ras-related protein Rab-8B OS=Dictyostelium discoi... [more]
RB1BV_BETVU9.536e-6459.71Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB... [more]
ARA3_ARATH5.233e-6257.69Ras-related protein ARA-3 OS=Arabidopsis thaliana ... [more]
YPTV2_VOLCA1.988e-6159.90GTP-binding protein yptV2 OS=Volvox carteri GN=YPT... [more]
YPT2_SCHPO9.869e-6155.84GTP-binding protein ypt2 OS=Schizosaccharomyces po... [more]
RAB1_THEPA1.425e-5962.03Ras-related protein Rab-1 OS=Theileria parva GN=ra... [more]
RAB8_DISOM2.058e-5854.92Ras-related protein Rab-8 OS=Discopyge ommata PE=2... [more]
RAB1_THEAN2.687e-5860.96Ras-related protein Rab-1 OS=Theileria annulata GN... [more]
RAB8B_RAT3.510e-5855.26Ras-related protein Rab-8B OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753649 ID=EY753649; Name=EY753649; organism=Citrus sinensis; type=EST; length=879bp
CGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTTGTCTTCTGTTT
TTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGAGATCTCGCCGA
AGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTTTTTCTTTTACA
CAAATCTACGACGATGAATCCTGAATATGACTATCTGTTTAAGCTTCTGC
TTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCTTGAGATTTGCT
GATGATTCATATATTGAGAGTTACATCAGCACCATAGGAGTTGATTTTAA
AATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACTTCAAATTTGGG
ATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCAGCTACTACCGT
GGGGCACATGGTATCATAATTGTTTATGATGTGACAGACCAAGAGAGCTT
CAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTATGCTAGTGATA
ATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCACTGCAAATAAG
GTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAAATTGGAATACC
TTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGAACAGGCATTCA
TGGCCATGGCTGCTTTCATCAAGGATAGAATGGCAAGTCAACCATCCATG
AACAATGCAAGGGCCTCCACTGTACAGATCAAAGGGCANCCTGTTGCACA
NAAGAGTGGCTGCTGCTCTACTAAGNATCATNGNATATATCTGNCGGGGG
TCTGCTGGACCTATGGGGTGTAATGCTTTTCATCTTTCAGTGAAAACTTG
TCATCTGGACAACTCATAAAAATGTTCTC
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