EY753649

Overview
NameEY753649
Unique NameEY753649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.280e-49
Identity = 89/169 (52.66%), Postives = 124/169 (73.37%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRM 682
            +DY+FKLLLIG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF  V+ W  +I  Y+ DN   +LVGNKCDL   +VV  E  +  AD++G  F E SAK++ NV+Q F  +   I D+M
Sbjct:   19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKM 187          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.280e-49
Identity = 92/200 (46.00%), Postives = 139/200 (69.50%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMA----SQPSMNNARASTVQIKGXPVAXKSGC 763
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   +LVGNKCD+   +VV  E  +  A+++G  F E SAK++ +V QAF  +   I D+M+    + PSM  +  +T ++   P   +  C
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNT-RLSDTPPLLQQNC 217          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.280e-49
Identity = 89/175 (50.86%), Postives = 129/175 (73.71%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPS 697
            YD  FK++L+GDSGVGK+CLL+RF D +++  ++IST+G+DF+ + ++ DG  +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI  YA  +V  +L+GNK D T  +VV  E  +  A E G+PFMETSAK   NV+ AF A+A  +K R    PS
Sbjct:   61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.978e-49
Identity = 94/200 (47.00%), Postives = 135/200 (67.50%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRM--ASQPSMNNARASTVQIKGXPVAXKSGCCS 769
            +DY+FKLLLIG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF  V+ W  +I  Y+ DN   +LVGNKCDL   +VV  E  +  AD++G  F E SAK++ NV+Q F  +   I ++M  + +PS ++         G   A +   CS
Sbjct:   19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCS 218          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.890e-49
Identity = 95/201 (47.26%), Postives = 135/201 (67.16%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRM--ASQPSM---NNARASTVQIKGXPVAXKSGC 763
            +DY+FKLLLIG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF  V+ W  +I  Y+ DN   +LVGNKCDL   +VVS E  +  A ++G  F E SAK++ NV+Q F  +   I D+M  + +PS    +N +   +     P     GC
Sbjct:   19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGPALGDTPPPQPSSCGC 219          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.080e-49
Identity = 91/200 (45.50%), Postives = 138/200 (69.00%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMA----SQPSMNNARASTVQIKGXPVAXKSGC 763
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ DN   +LVGNKCD+   +VV  E  +  A+++G  F E SAK++ +V QAF  +   I D+M+    + PS+     +T ++   P   +  C
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDTLDTDPSLLGTSKNT-RLSDTPPLLQQNC 217          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.521e-48
Identity = 93/160 (58.13%), Postives = 123/160 (76.88%), Query Frame = 2
Query:  185 LFKLLLIGDSGVGKSCLLLRFAD-DSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMA 661
            +FK+LLIGDS VGK+ LLLRF D +++ E+ ++   VD+K + +  DG+T  LQIWDTAGQERFRTITSS+YRGAHG+++ YDVTDQ ++NNV  W+ EI RY    V+++LVGNKCDL   K+V+   A+ +AD +GIPF+ETSA    NVE+AFMAMA
Sbjct:    6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMA 165          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.336e-48
Identity = 88/175 (50.29%), Postives = 128/175 (73.14%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPS 697
            YD  FK++L+GDSGVGK+CLL+RF D +++  ++IST+G+DF+ + V+ DG  +KLQIWDTAGQERFR++T +YYR AH ++++YDVT++ SF++++ WL EI  +A D+V  +L+GNK D    + V  E A+  A + G+PFMETSAK   NV+ AF A+A  +K R    PS
Sbjct:   60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS 234          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.251e-47
Identity = 93/209 (44.50%), Postives = 140/209 (66.99%), Query Frame = 2
Query:  152 KSTTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPSMNNARASTVQIKGXPVAXK--SGCCS 769
            +S   +P YD   K++L+GDSGVGK+C L++F D +++  ++I+T+G+D + + V  DG  +KLQIWDTAGQERFR++T +YYR A  ++++YD+T+Q SF+N++ WL EI  YA  +V  +L+GNK D+++ +V+  E  +  A E G+PFMETSAK   NVE AF+A+A  +K R   QP        + QI+    + K  S CCS
Sbjct:   18 RSPPFSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQPD-----EPSFQIRDYVESQKKRSSCCS 221          
BLAST of EY753649 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 1.251e-47
Identity = 88/175 (50.29%), Postives = 127/175 (72.57%), Query Frame = 2
Query:  176 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMAAFIKDRMASQPS 697
            YD  FK++L+GDSGVGK+CLL+RF D +++  ++IST+G+DF+ + ++ DG  +KLQ+WDTAGQERFR++T +YYR AH ++++YDVT++ SF+N++ WL EI  YA  +V  +L+GNK D    +VV  E  +  A E G+PFMETSAK   NV+ AF A+A  +K R    PS
Sbjct:   60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKAPS 234          
The following BLAST results are available for this feature:
BLAST of EY753649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB3D_MOUSE2.280e-4952.66Ras-related protein Rab-3D OS=Mus musculus GN=Rab3... [more]
RAB3B_HUMAN2.280e-4946.00Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3... [more]
RAB26_RAT2.280e-4950.86Ras-related protein Rab-26 OS=Rattus norvegicus GN... [more]
RAB3D_HUMAN2.978e-4947.00Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3... [more]
RAB3D_RAT3.890e-4947.26GTP-binding protein Rab-3D OS=Rattus norvegicus GN... [more]
RAB3B_BOVIN5.080e-4945.50Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B ... [more]
RABG1_DICDI2.521e-4858.13Ras-related protein RabG1 OS=Dictyostelium discoid... [more]
RAB26_BOVIN7.336e-4850.29Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 ... [more]
RAB37_MOUSE1.251e-4744.50Ras-related protein Rab-37 OS=Mus musculus GN=Rab3... [more]
RAB26_HUMAN1.251e-4750.29Ras-related protein Rab-26 OS=Homo sapiens GN=RAB2... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-C08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753649 ID=EY753649; Name=EY753649; organism=Citrus sinensis; type=EST; length=879bp
CGTTTCAGTATTTTCTTTCTTTTTTTTCTTTTTTGTCTTGTCTTCTGTTT
TTGTTGACATTTAATTTCCCGGCGAAACTCATATCACGAGATCTCGCCGA
AGATAATAATCTGTTTTGGTTAACCGAACCCGAAGCTTTTTTCTTTTACA
CAAATCTACGACGATGAATCCTGAATATGACTATCTGTTTAAGCTTCTGC
TTATTGGAGATTCCGGTGTTGGCAAATCTTGTCTTCTCTTGAGATTTGCT
GATGATTCATATATTGAGAGTTACATCAGCACCATAGGAGTTGATTTTAA
AATACGCACTGTTGAGCAAGATGGGAAGACCATTAAACTTCAAATTTGGG
ATACTGCTGGTCAAGAAAGATTTAGGACAATCACCAGCAGCTACTACCGT
GGGGCACATGGTATCATAATTGTTTATGATGTGACAGACCAAGAGAGCTT
CAATAATGTCAAGCAGTGGTTGAATGAAATTGACCGTTATGCTAGTGATA
ATGTCAACAAACTTCTGGTTGGAAACAAGTGTGATCTCACTGCAAATAAG
GTTGTCTCGTACGAAACAGCCAAGGCATTTGCAGATGAAATTGGAATACC
TTTCATGGAAACTAGTGCAAAAGATTCTACCAACGTGGAACAGGCATTCA
TGGCCATGGCTGCTTTCATCAAGGATAGAATGGCAAGTCAACCATCCATG
AACAATGCAAGGGCCTCCACTGTACAGATCAAAGGGCANCCTGTTGCACA
NAAGAGTGGCTGCTGCTCTACTAAGNATCATNGNATATATCTGNCGGGGG
TCTGCTGGACCTATGGGGTGTAATGCTTTTCATCTTTCAGTGAAAACTTG
TCATCTGGACAACTCATAAAAATGTTCTC
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