EY753602

Overview
NameEY753602
Unique NameEY753602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO5_YEAST (GTP-binding protein RHO5 OS=Saccharomyces cerevisiae GN=RHO5 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 8.802e-34
Identity = 81/203 (39.90%), Postives = 110/203 (54.19%), Query Frame = 1
Query:  232 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVN------------------------------LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-----------PGVPIILVGTKLDLRDD--KQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS 711
            R IKCV +GDGAVGKT +LISYT+N+FPTDYVPTVFDN+S  + +   T +                              + LWDTAGQEDY+RLRPL Y   D+F++ FS+   AS+ NV +KW+PEL+  +              PI+LVGTK DLRDD   Q  +    +  ++  + +E  +  G   Y  CS+ T +
Sbjct:    2 RSIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSAATQA 204          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOD_MOUSE (Rho-related GTP-binding protein RhoD OS=Mus musculus GN=Rhod PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.150e-33
Identity = 66/157 (42.04%), Postives = 101/157 (64.33%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSK 702
            +K V VGDG  GKT +++ +    FP  Y PTVF+ ++A + + G  V+L +WDTAGQ+DY+RLRPL Y  A+V +L F + +  S++NV+ +W PE+ H+  GVPII+VG K+DLR DK     +      P+T  +G +    +G+ AY+ CS++
Sbjct:   18 VKVVLVGDGGCGKTSLMMVFAKGAFPESYSPTVFERYNATLQMKGKPVHLQIWDTAGQDDYDRLRPLFYPDANVLLLCFDVTNPNSFDNVSNRWYPEVTHFCKGVPIIVVGCKIDLRKDKVLVNNLRKKRLEPVTYHRGHDMARSVGAVAYLECSAR 174          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOF_MOUSE (Rho-related GTP-binding protein RhoF OS=Mus musculus GN=Rhof PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.501e-33
Identity = 71/165 (43.03%), Postives = 101/165 (61.21%), Query Frame = 1
Query:  214 AQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGA--VPITTAQGEEPEELIGSPAYIGCSSK 702
            A  SA + +K V VGDG  GKT +L+ Y   +FP  Y P+VF+ ++A+V V    V L L+DTAGQEDY+RLRPLSY+   + ++ + +++  SY+NV  KW PE+ H+  G+P +L+G K DLR DK+       A   PIT  QG    E +    Y+ CS+K
Sbjct:   12 APSSARKELKIVIVGDGGCGKTSLLMVYCQGSFPEHYAPSVFEKYTASVTVGNKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPTVLIGCKTDLRKDKEQLRKLRAAQLEPITYTQGLNACEQMRGALYLECSAK 176          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACG_DICDI (Rho-related protein racG OS=Dictyostelium discoideum GN=racG PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.501e-33
Identity = 70/158 (44.30%), Postives = 102/158 (64.56%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IK   VG+G +GKT ML+SYTSN+   +Y PTVFDN+S  ++ +    NL LWDTAGQE++++LR LSY   DVF+L FSLI+ +S+ N+   W+ EL    P  PI+LVGT++DL+ +      +     +PI+T QG E  + I +  ++ CS+ T
Sbjct:    4 IKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOF_HUMAN (Rho-related GTP-binding protein RhoF OS=Homo sapiens GN=RHOF PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.961e-33
Identity = 69/157 (43.95%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGA--VPITTAQGEEPEELIGSPAYIGCSSK 702
            +K V VGDG  GKT +L+ Y+  +FP  Y P+VF+ ++A+V V    V L L+DTAGQEDY+RLRPLSY+   + ++ + +++  SY+NV  KW PE+ H+  G+P++L+G K DLR DK+       A   PIT  QG    E I +  Y+ CS+K
Sbjct:   20 LKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDYDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKEQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAK 176          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACL_DICDI (Rho-related protein racL OS=Dictyostelium discoideum GN=racL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.368e-33
Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  232 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCS 696
            ++IK V  GDGAVGKT +LI++ S  FP DY PTVFDNFS   +      NLGL+DTAGQED++RLRPL Y   D+F++ +S+I+  SY NV  KW  E++ Y    +P+ILVGT+ DLR DK  +  +      PI+  +G    + IG+ A+  CS
Sbjct:    2 QYIKMVICGDGAVGKTSLLIAFASGEFPRDYQPTVFDNFSTLYMFQNKAYNLGLFDTAGQEDFDRLRPLGYNDTDLFLICYSVINPPSYANVYDKWYSEIKLYTGSEIPLILVGTQNDLRHDKATRETLALKQQAPISYEEGMMMRKRIGAKAFTECS 159          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO2_SCHPO (GTP-binding protein rho2 OS=Schizosaccharomyces pombe GN=rho2 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.451e-33
Identity = 74/157 (47.13%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            K V VGDGA GKT +L  +T   FPT+YVPTVF+N+ ++  VDG +V L LWDTAGQE+Y RLRP+SY  A + ++ F++ S  S ENV+ KWI E+    P VP ILVG K DLR D      +       + + Q E   + IG+  Y+ CSS T
Sbjct:   10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLT 166          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: CDC42_COLGL (Cell division control protein 42 homolog OS=Colletotrichum gloeosporioides GN=CDC42 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.168e-32
Identity = 78/180 (43.33%), Postives = 108/180 (60.00%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT-----NSF*CCFKGGLQPSKQKKR 762
            IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++  V++      LGL+DTAGQEDY+RLRPLSY   DVF++ FS+ S AS+ENVA+          PGV +++V    +     +  +      P+    GE   + +G+  Y+ CS+ T     + F       L+P   KK+
Sbjct:    6 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVARSG-SRGTSPLPGV-LLIVAPVTERGSSVREKLSKQKMSPVRKEDGERMAKDLGAVKYVECSALTQFKLKDVFDEAIVAALEPPAPKKK 183          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.108e-31
Identity = 66/182 (36.26%), Postives = 109/182 (59.89%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRER 768
            IKCV VGD AVGKT +L+ +TS TFP  Y PTV++N   +V++DG  ++LGLWDTAG + +  +RPLSY+ ADV ++ +S+ +  S+ N+  KWI E+R   P  P+++V T+ D R+     +    A  +   +G+   + + +  Y+ CS+ +N      F C  +  +  ++++ R R
Sbjct:    5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE-----VGPHRASCVNAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRR 181          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACM_DICDI (Rho-related protein racM OS=Dictyostelium discoideum GN=racM PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.190e-30
Identity = 69/163 (42.33%), Postives = 99/163 (60.74%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYT-SNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD-----DKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTN 708
            IK VT+GD  VGKT +L++YT S +FP +YVPT  DNF     ++G   +L +WDTAG E Y+ LRPL Y   D+ +L F++ ++ S+ ++   WI E+  Y PG+PIILVGTK+DLRD     DK  F+ +         +G    + IG+  +  CSS+ N
Sbjct:    6 IKIVTIGDYGVGKTTLLMTYTASGSFPQEYVPTALDNFIHEATINGKKASLSIWDTAGGEYYHELRPLIYPETDILLLLFAIENRESFLHIKTNWITEINQYIPGIPIILVGTKIDLRDSDLIKDKSNFVKY--------KEGLALSKEIGASHFCECSSRMN 160          
The following BLAST results are available for this feature:
BLAST of EY753602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RHO5_YEAST8.802e-3439.90GTP-binding protein RHO5 OS=Saccharomyces cerevisi... [more]
RHOD_MOUSE1.150e-3342.04Rho-related GTP-binding protein RhoD OS=Mus muscul... [more]
RHOF_MOUSE1.501e-3343.03Rho-related GTP-binding protein RhoF OS=Mus muscul... [more]
RACG_DICDI1.501e-3344.30Rho-related protein racG OS=Dictyostelium discoide... [more]
RHOF_HUMAN1.961e-3343.95Rho-related GTP-binding protein RhoF OS=Homo sapie... [more]
RACL_DICDI4.368e-3346.84Rho-related protein racL OS=Dictyostelium discoide... [more]
RHO2_SCHPO7.451e-3347.13GTP-binding protein rho2 OS=Schizosaccharomyces po... [more]
CDC42_COLGL2.168e-3243.33Cell division control protein 42 homolog OS=Collet... [more]
RHOH_BOVIN9.108e-3136.26Rho-related GTP-binding protein RhoH OS=Bos taurus... [more]
RACM_DICDI1.190e-3042.33Rho-related protein racM OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753602 ID=EY753602; Name=EY753602; organism=Citrus sinensis; type=EST; length=795bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAACTAAAAAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCGGTGACGGCGCCGTCGGAAAAACTTGCATGCTTATTTCTTACACC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTCAG
TGCGAATGTGGTTGTTGATGGGAGTACGGTCAACTTAGGGTTATGGGACA
CTGCTGGTCAGGAGGATTACAATAGATTGAGACCGTTAAGTTATAGAGGA
GCTGATGTGTTTATTCTTGCATTCTCACTGATTAGCAAGGCCAGCTATGA
AAATGTCGCCAAGAAGTGGATTCCAGAACTGAGGCACTATGCGCCCGGTG
TTCCAATAATTCTTGTTGGGACTAAGCTAGATCTTCGGGATGATAAGCAG
TTCTTTATTGATCATNCAGGTGCAGTACCAATTACTACAGCTCAGGGAGA
GGAACCTGAGGAACTGATTGGATCTCCTGCGTACATCGGATGTAGTTCAA
AGACCAACAGTTTTTGATGCTGCTTTAAAGGGGGGCTTCAGCCTTCAAAG
CAAAAGAAAAGAGAAAGAAGTCCCTAGGGCTTGCTCCTACTGTGA
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