EY753602

Overview
NameEY753602
Unique NameEY753602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.554e-30
Identity = 66/182 (36.26%), Postives = 108/182 (59.34%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRER 768
            IKCV VGD AVGKT +L+ +TS TFP  Y PTV++N   +V +DG  ++LGLWDTAG + +  +RPLSY+ ADV ++ +S+ +  S+ N+  KWI E+R   P  P+++V T+ D R+     +    A  I   +G+   + + +  Y+ CS+ +N      F C  +  +  ++++ R +
Sbjct:    5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE-----VGPHRASCINAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRK 181          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.554e-30
Identity = 66/182 (36.26%), Postives = 109/182 (59.89%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRER 768
            IKCV VGD AVGKT +L+ +TS TFP  Y PTV++N   +V +DG  ++LGLWDTAG + +  +RPLSY+ ADV ++ +S+ +  S+ N+  KWI E+R   P  P+++V T+ D R+     +    A  +   +G++  + + +  Y+ CS+ +N      F C  +  +  ++++ R R
Sbjct:    5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE-----MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRR 181          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO4_ASHGO (GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO4 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.461e-30
Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVD-GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IK V VGDGA GKT +L+SYT   FP DYVPT+F+N+  N+    G  + L LWDTAGQE+Y+RLRPLSY   D+ ++ ++  ++ S  N  + W PE+RH+ P  P++LVG K DL     + +D    + +     E     +G+  ++ CS+KT
Sbjct:   53 IKIVVVGDGATGKTSLLMSYTQGQFPEDYVPTIFENYVTNIEGPRGKVIELALWDTAGQEEYSRLRPLSYGDVDIVMVCYAADNRTSLTNAEELWFPEVRHFCPHAPMMLVGLKSDL-----YSLDALDRL-VDPTDAELVARKMGAFVHLQCSAKT 203          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.461e-30
Identity = 66/156 (42.31%), Postives = 97/156 (62.18%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTN 708
            K V +GDGA GKT +L  +T   FP  Y PT+F+N+  ++ VDG+++ L LWDTAGQE+Y++LR LSY    V ++ F++ S+ S ENV  KW+PE+    PGV ++LV  K DLR   +  +DH  +  I   +G    + I +  Y+ CS+K N
Sbjct:   15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQVDH--SKIIDYEEGLAAAKKINAVRYLECSAKLN 168          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.718e-29
Identity = 67/159 (42.14%), Postives = 101/159 (63.52%), Query Frame = 1
Query:  223 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSS 699
            +  + +K V VGDGAVGKTC+L++++    PT YVPTVF+NFS  +        L LWDTAGQE+Y+RLRPLSY  +DV +L F++ ++ S++N++ KW PE++H    + +IL   K+DLR D         +  +T  +G++  + +G  AYI  SS
Sbjct:   16 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKDV--------SDDVTKQEGDDLCQKLGCVAYIEASS 162          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29
Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXG-AVPITTAQGEEPEELIGSPAYIGCSSKT 705
            K V +GDGA GKT +L  +T   FP  Y PTVF+N+  +  VDG  V+L LWDTAGQE+Y RLRP SY  AD+ ++ F++ +  S  N   KW  E   Y P  PI+LVG K DLR +  F  +     VPI  A  ++    IG+  Y+ CS+ T
Sbjct:    9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDA--KQVARAIGAKKYMECSALT 162          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.454e-28
Identity = 64/163 (39.26%), Postives = 100/163 (61.35%), Query Frame = 1
Query:  235 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGV--PIILVGTKLDLRDDK---QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTN 708
            +IK + +GD   GKT M+++Y++ +FPT YVP+  D  S ++  +    ++G WD++   +++  RP +Y   +V IL FS+ S  S+ENV+KKWIPE+R YAP +  PIIL+GTK DLR+D+       ++    PI+  QG    + I +  Y+ CSS  N
Sbjct:    5 YIKLLVLGDSKTGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSSLCN 167          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28
Identity = 69/159 (43.40%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEE---PEELIGSPAYIGCSSKTN 708
            K V  GDGA GKT +L  +T   F   Y PTVF+N+  ++ +D   V L LWDTAGQE+++RLR LSY    V ++ FS+ +  S ENV  KW+ E+  Y PGV ++LV +K DLRDD    +D        T Q EE       I +  Y+ CSSK N
Sbjct:   19 KVVVCGDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPA-VLDRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHN 176          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27
Identity = 59/164 (35.98%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  220 MSASRFIKC--VTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFID--HXGAVPITTAQGEEPEELIGSPAYIGCSS 699
            M  ++ +KC  V VGD   GKT +L  +  + FP +YVPTVF+N++A+  +D   + L LWDT+G   Y+ +RPLSY  +D  ++ F +    + ++V KKW  E++ + P   ++LVG K DLR D    ++  +    P++  QG    + IG+  YI CS+
Sbjct:   16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27
Identity = 59/164 (35.98%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  220 MSASRFIKC--VTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFID--HXGAVPITTAQGEEPEELIGSPAYIGCSS 699
            M  ++ +KC  V VGD   GKT +L  +  + FP +YVPTVF+N++A+  +D   + L LWDT+G   Y+ +RPLSY  +D  ++ F +    + ++V KKW  E++ + P   ++LVG K DLR D    ++  +    P++  QG    + IG+  YI CS+
Sbjct:   16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 179          
The following BLAST results are available for this feature:
BLAST of EY753602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RHOH_MOUSE1.554e-3036.26Rho-related GTP-binding protein RhoH OS=Mus muscul... [more]
RHOH_HUMAN1.554e-3036.26Rho-related GTP-binding protein RhoH OS=Homo sapie... [more]
RHO4_ASHGO3.461e-3042.04GTP-binding protein RHO4 OS=Ashbya gossypii GN=RHO... [more]
RHO3_SCHPO3.461e-3042.31GTP-binding protein rho3 OS=Schizosaccharomyces po... [more]
RHO1_ENTHI1.718e-2942.14Ras-like GTP-binding protein RHO1 OS=Entamoeba his... [more]
RHO2_YEAST8.525e-2944.23GTP-binding protein RHO2 OS=Saccharomyces cerevisi... [more]
RACI_DICDI1.454e-2839.26Rho-related protein racI OS=Dictyostelium discoide... [more]
RHO3_SCHCO9.426e-2843.40GTP-binding protein Rho3 OS=Schizophyllum commune ... [more]
RND3_RAT7.979e-2735.98Rho-related GTP-binding protein RhoE OS=Rattus nor... [more]
RND3_PONAB7.979e-2735.98Rho-related GTP-binding protein RhoE OS=Pongo abel... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753602 ID=EY753602; Name=EY753602; organism=Citrus sinensis; type=EST; length=795bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAACTAAAAAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCGGTGACGGCGCCGTCGGAAAAACTTGCATGCTTATTTCTTACACC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTCAG
TGCGAATGTGGTTGTTGATGGGAGTACGGTCAACTTAGGGTTATGGGACA
CTGCTGGTCAGGAGGATTACAATAGATTGAGACCGTTAAGTTATAGAGGA
GCTGATGTGTTTATTCTTGCATTCTCACTGATTAGCAAGGCCAGCTATGA
AAATGTCGCCAAGAAGTGGATTCCAGAACTGAGGCACTATGCGCCCGGTG
TTCCAATAATTCTTGTTGGGACTAAGCTAGATCTTCGGGATGATAAGCAG
TTCTTTATTGATCATNCAGGTGCAGTACCAATTACTACAGCTCAGGGAGA
GGAACCTGAGGAACTGATTGGATCTCCTGCGTACATCGGATGTAGTTCAA
AGACCAACAGTTTTTGATGCTGCTTTAAAGGGGGGCTTCAGCCTTCAAAG
CAAAAGAAAAGAGAAAGAAGTCCCTAGGGCTTGCTCCTACTGTGA
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