EY753602

Overview
NameEY753602
Unique NameEY753602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.321e-13
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQ 600
            K + +G    GK+C+L  +  N F  D   T+   F + VV V G TV L +WDTAGQE +  +    YRGA   +L + + S+ +Y ++A  W+ + R  A P + +IL G K DL  +++
Sbjct:   10 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPERE 130          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: YPT7_YEAST (GTP-binding protein YPT7 OS=Saccharomyces cerevisiae GN=YPT7 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTV-NLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-----PGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEP 657
            +K + +GD  VGKT ++  Y ++ +   Y  T+  +F +  V VDG  V  + +WDTAGQE +  L    YRGAD  +L + + + +S+EN+ K W  E   +A        P +++G K+D  + K+  +    A  +  + G+ P
Sbjct:    9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPETFPFVILGNKIDAEESKK-IVSEKSAQELAKSLGDIP 153          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  223 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTN 708
            S    +K + +GD  VGK+C+L+ +  + F   ++ T+  +F    V ++G  V L LWDTAGQE +  +    YRGA   IL + +  + ++ N+ K+W   +  +A     ++LVG K D+               +T  QGE   + +G P +I  S+K +
Sbjct:   16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANI-KQWFKTVNEHANDEAQLLLVGNKSDM-----------DTRVVTYEQGEALAKELGLP-FIESSAKND 166          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR 588
            K V +GD  VGK+ +L  +T N F  +   T+   F+   + V+G TV   +WDTAGQE Y  +    YRGA   +L + +  + +++NV ++W+ ELR +A   + I++ G K DL+
Sbjct:   14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-QRWLRELRDHADSNIVIMMAGNKSDLK 130          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 50/134 (37.31%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV------DGST-----VNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELR--HYAPGVPIILVGTKLDLRDDKQ 600
            IK + +GD  VGKT  L  YT N F   ++ TV  +F    V       +G T     V+L LWDTAGQE +  L    +R A  F+L F L S+ S+ NV + W+ +L+   Y     I+L+G K DL D ++
Sbjct:   10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIVLIGNKADLPDQRE 142          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RASL_COPC7 (24 kDa Ras-like protein (Fragments) OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC-RAS PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  208 LVAQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFFID-------HXGAVPITTAQGEEPEELIGSPA 681
            + A+    R  K V VG G VGK+ + I +  + F  +Y PT+ D++    ++D     L + DTAGQE+Y  +R    R  + F+L +S+ S+ S+E ++      LR       P+I+V  K DL  ++Q  ++       H G   I T+  ++ E+  G PA
Sbjct:    1 MAARAQFLREYKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCIIDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYERQVGMNEGRDLAKHFGCKFIETS-AKQREQQTGRPA 165          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 1
Query:  208 LVAQMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV--AKKWIPELRHYAPGVPIILVGTKLDL 585
            L A + A    K V VG   VGK+ + I    N F  +Y PT+ D++   VV+DG T  L + DT GQE+Y+ +R    R  + F+  F++ +  S+E++   ++ I  ++  +  VP++LVG K DL
Sbjct:   46 LAAPVEAMTEYKLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKD-SDDVPMVLVGNKCDL 172          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAN_DICDI (GTP-binding nuclear protein Ran OS=Dictyostelium discoideum GN=ranA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1
Query:  220 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG-STVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 597
            M+    IK V VGDG VGKT  +  + +  F   Y+PT+  +    +       ++  +WDTAGQE +  LR   Y   +  I+ F + S+ SY+NV   W  +L      +PI+L G K+D++D K
Sbjct:    1 MAEKEQIKLVLVGDGGVGKTTFVQRHLTGEFEPRYIPTLGVSVHPLIFYTNFGKIHFNVWDTAGQEKFGGLRDGYYIQGNCAIIMFDVTSRISYKNV-PNWHSDLTRVCENIPIVLCGNKVDVKDRK 126          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDL-RDDK 597
            +K +T+GD  VGKT +   Y +  +  +  P++  D F   + V+   V L +WDT GQE +    P  +RGA+ + L F + ++ S+ N+ K W+ E+  Y  G +P +LVGTK D+ R DK
Sbjct:    8 LKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGK-WMDEIIKYCYGNIPFVLVGTKSDIPRTDK 129          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 42/126 (33.33%), Postives = 70/126 (55.56%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFFID 612
            K + +G+ +VGKT  L  Y  ++F + +V TV  +F    V  G   V L +WDTAGQE Y  +    YRGA  FIL + + ++ S+ +V + W  +++ Y+     ++LVG K D+  ++   +D
Sbjct:   24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSV-QDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMD 148          
The following BLAST results are available for this feature:
BLAST of EY753602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB4B_CANFA1.321e-1335.25Ras-related protein Rab-4B OS=Canis familiaris GN=... [more]
YPT7_YEAST1.726e-1330.61GTP-binding protein YPT7 OS=Saccharomyces cerevisi... [more]
SEC4_CANGA1.726e-1329.27Ras-related protein SEC4 OS=Candida glabrata GN=SE... [more]
RB2BV_BETVU1.726e-1335.59Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB... [more]
RB27B_BOVIN1.726e-1337.31Ras-related protein Rab-27B OS=Bos taurus GN=RAB27... [more]
RASL_COPC71.726e-1330.1224 kDa Ras-like protein (Fragments) OS=Coprinopsis... [more]
RASH_MSVHA1.726e-1334.38Transforming protein p29 OS=Harvey murine sarcoma ... [more]
RAN_DICDI1.726e-1333.86GTP-binding nuclear protein Ran OS=Dictyostelium d... [more]
RABL_DICDI1.726e-1335.77Ras-related protein RabL OS=Dictyostelium discoide... [more]
RAB3_CAEEL1.726e-1333.33Ras-related protein Rab-3 OS=Caenorhabditis elegan... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753602 ID=EY753602; Name=EY753602; organism=Citrus sinensis; type=EST; length=795bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAACTAAAAAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCGGTGACGGCGCCGTCGGAAAAACTTGCATGCTTATTTCTTACACC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTCAG
TGCGAATGTGGTTGTTGATGGGAGTACGGTCAACTTAGGGTTATGGGACA
CTGCTGGTCAGGAGGATTACAATAGATTGAGACCGTTAAGTTATAGAGGA
GCTGATGTGTTTATTCTTGCATTCTCACTGATTAGCAAGGCCAGCTATGA
AAATGTCGCCAAGAAGTGGATTCCAGAACTGAGGCACTATGCGCCCGGTG
TTCCAATAATTCTTGTTGGGACTAAGCTAGATCTTCGGGATGATAAGCAG
TTCTTTATTGATCATNCAGGTGCAGTACCAATTACTACAGCTCAGGGAGA
GGAACCTGAGGAACTGATTGGATCTCCTGCGTACATCGGATGTAGTTCAA
AGACCAACAGTTTTTGATGCTGCTTTAAAGGGGGGCTTCAGCCTTCAAAG
CAAAAGAAAAGAGAAAGAAGTCCCTAGGGCTTGCTCCTACTGTGA
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