EY753602

Overview
NameEY753602
Unique NameEY753602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: CDC42_MOUSE (Cell division control protein 42 homolog OS=Mus musculus GN=Cdc42 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.225e-44
Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++  V++ G    LGL+DTAGQEDY+RLRPLSY   DVF++ FS++S +S+ENV +KW+PE+ H+ P  P +LVGT++DLRDD      +      PIT    E+    + +  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: CDC42_HUMAN (Cell division control protein 42 homolog OS=Homo sapiens GN=CDC42 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.225e-44
Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++  V++ G    LGL+DTAGQEDY+RLRPLSY   DVF++ FS++S +S+ENV +KW+PE+ H+ P  P +LVGT++DLRDD      +      PIT    E+    + +  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: CDC42_CANFA (Cell division control protein 42 homolog OS=Canis familiaris GN=CDC42 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.225e-44
Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++  V++ G    LGL+DTAGQEDY+RLRPLSY   DVF++ FS++S +S+ENV +KW+PE+ H+ P  P +LVGT++DLRDD      +      PIT    E+    + +  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACD_ENTHI (Rho-related protein racD (Fragment) OS=Entamoeba histolytica GN=RACD PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44
Identity = 83/163 (50.92%), Postives = 115/163 (70.55%), Query Frame = 1
Query:  229 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS 711
            ++ +K V VGDG+VGKTC+LI YT+N FP DYVPTVFDN+ A + VDG  +NLGLWDTAGQED  +LRPLSY   D+F+L FS+IS+ S+ N++ KW+PE++HY P   +++VGT  D R+D+     +      PITT +GE+  + I +  Y+ CS+ T S
Sbjct:    6 AKSVKLVVVGDGSVGKTCLLICYTTNEFPKDYVPTVFDNYMAPMTVDGEPINLGLWDTAGQEDSEQLRPLSYPNTDLFLLCFSVISRTSFNNISSKWLPEIKHYEPKCKMMVVGTNTDCRNDEAMIRKLADENQKPITTEEGEKLAKDIKAICYMECSALTRS 168          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOJ_MOUSE (Rho-related GTP-binding protein RhoJ OS=Mus musculus GN=Rhoj PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 7.942e-43
Identity = 81/161 (50.31%), Postives = 115/161 (71.43%), Query Frame = 1
Query:  229 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            +R +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++  V V G    LGL+DTAGQEDYN+LRPLSY   DVF++ FS+++ ASY NV ++W+PEL+   P VP +L+GT++DLRDD +    + +    P+T   G +  + IG+  Y+ CS+ T
Sbjct:   19 NRILKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALT 179          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOJ_HUMAN (Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 86/184 (46.74%), Postives = 121/184 (65.76%), Query Frame = 1
Query:  232 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKR 762
            + +KCV VGDGAVGKTC+L+SY ++ FP +YVPTVFD+++  V V G    LGL+DTAGQEDYN+LRPLSY   DVF++ FS+++ ASY NV ++W+PEL+   P VP +L+GT++DLRDD +    + +    P+T   G +  + IG+  Y+ CS+ T       F         P K+KKR
Sbjct:   20 KMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIFHPKKKKKR 203          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO1_CAEEL (Ras-like GTP-binding protein rhoA OS=Caenorhabditis elegans GN=rho-1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.311e-42
Identity = 91/180 (50.56%), Postives = 114/180 (63.33%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKK 759
            K V VGDGA GKTC+LI ++ + FP  YVPTVF+N+ A++ VDG  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE+RH+ P VPIILVG K DLR D Q    +      P+   QG    E IG+ AY+ CS+KT       F    +  LQ  K+KK
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQQKKKKK 186          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RAC2_CAEEL (Ras-related protein rac-2 OS=Caenorhabditis elegans GN=rac-2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.942e-42
Identity = 82/158 (51.90%), Postives = 110/158 (69.62%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IKCV VGDGAVGKTC+L+SYT+N FP +Y+ TVFD +S NV+VDG  +NL LWDTAGQ+DY++ R LS+   DVF++ F+L + AS+ENV  KW PE+ H+ P  PIILVGTK DLR+D+     +      P++  QG    + I +  Y+ CS+ T
Sbjct:    4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALT 161          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOC_CHICK (Rho-related GTP-binding protein RhoC OS=Gallus gallus GN=RHOC PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.147e-41
Identity = 88/185 (47.57%), Postives = 116/185 (62.70%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERSP 774
            K V VGDGA GKTC+LI ++ + FP  YVPTVF+N+ A++ VDG  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE++H+ P VPIILVG K DLR+D+  +  +      P+   +G +    I +  Y+ CS+KT       F    + GLQ  K KKR   P
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCP 191          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOC_PONAB (Rho-related GTP-binding protein RhoC OS=Pongo abelii GN=RHOC PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 87/185 (47.03%), Postives = 116/185 (62.70%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERSP 774
            K V VGDGA GKTC+LI ++ + FP  YVPTVF+N+ A++ VDG  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE++H+ P VPIILVG K DLR D+  +  +      P+ + +G +    I +  Y+ CS+KT       F    + GLQ  K K+R   P
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRRRGCP 191          
The following BLAST results are available for this feature:
BLAST of EY753602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC42_MOUSE3.225e-4453.16Cell division control protein 42 homolog OS=Mus mu... [more]
CDC42_HUMAN3.225e-4453.16Cell division control protein 42 homolog OS=Homo s... [more]
CDC42_CANFA3.225e-4453.16Cell division control protein 42 homolog OS=Canis ... [more]
RACD_ENTHI4.211e-4450.92Rho-related protein racD (Fragment) OS=Entamoeba h... [more]
RHOJ_MOUSE7.942e-4350.31Rho-related GTP-binding protein RhoJ OS=Mus muscul... [more]
RHOJ_HUMAN1.355e-4246.74Rho-related GTP-binding protein RhoJ OS=Homo sapie... [more]
RHO1_CAEEL2.311e-4250.56Ras-like GTP-binding protein rhoA OS=Caenorhabditi... [more]
RAC2_CAEEL3.942e-4251.90Ras-related protein rac-2 OS=Caenorhabditis elegan... [more]
RHOC_CHICK1.147e-4147.57Rho-related GTP-binding protein RhoC OS=Gallus gal... [more]
RHOC_PONAB1.956e-4147.03Rho-related GTP-binding protein RhoC OS=Pongo abel... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753602 ID=EY753602; Name=EY753602; organism=Citrus sinensis; type=EST; length=795bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAACTAAAAAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCGGTGACGGCGCCGTCGGAAAAACTTGCATGCTTATTTCTTACACC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTCAG
TGCGAATGTGGTTGTTGATGGGAGTACGGTCAACTTAGGGTTATGGGACA
CTGCTGGTCAGGAGGATTACAATAGATTGAGACCGTTAAGTTATAGAGGA
GCTGATGTGTTTATTCTTGCATTCTCACTGATTAGCAAGGCCAGCTATGA
AAATGTCGCCAAGAAGTGGATTCCAGAACTGAGGCACTATGCGCCCGGTG
TTCCAATAATTCTTGTTGGGACTAAGCTAGATCTTCGGGATGATAAGCAG
TTCTTTATTGATCATNCAGGTGCAGTACCAATTACTACAGCTCAGGGAGA
GGAACCTGAGGAACTGATTGGATCTCCTGCGTACATCGGATGTAGTTCAA
AGACCAACAGTTTTTGATGCTGCTTTAAAGGGGGGCTTCAGCCTTCAAAG
CAAAAGAAAAGAGAAAGAAGTCCCTAGGGCTTGCTCCTACTGTGA
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