EY753602

Overview
NameEY753602
Unique NameEY753602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOC_MOUSE (Rho-related GTP-binding protein RhoC OS=Mus musculus GN=Rhoc PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 87/185 (47.03%), Postives = 116/185 (62.70%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERSP 774
            K V VGDGA GKTC+LI ++ + FP  YVPTVF+N+ A++ VDG  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE++H+ P VPIILVG K DLR D+  +  +      P+ + +G +    I +  Y+ CS+KT       F    + GLQ  K K+R   P
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRRRGCP 191          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOC_HUMAN (Rho-related GTP-binding protein RhoC OS=Homo sapiens GN=RHOC PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 87/185 (47.03%), Postives = 116/185 (62.70%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERSP 774
            K V VGDGA GKTC+LI ++ + FP  YVPTVF+N+ A++ VDG  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE++H+ P VPIILVG K DLR D+  +  +      P+ + +G +    I +  Y+ CS+KT       F    + GLQ  K K+R   P
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRRRGCP 191          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOC_BOVIN (Rho-related GTP-binding protein RhoC OS=Bos taurus GN=RHOC PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 87/185 (47.03%), Postives = 116/185 (62.70%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK--QFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRERSP 774
            K V VGDGA GKTC+LI ++ + FP  YVPTVF+N+ A++ VDG  V L LWDTAGQEDY+RLRPLSY   DV ++ FS+ S  S EN+ +KW PE++H+ P VPIILVG K DLR D+  +  +      P+ + +G +    I +  Y+ CS+KT       F    + GLQ  K K+R   P
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRRRGCP 191          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOU_MOUSE (Rho-related GTP-binding protein RhoU OS=Mus musculus GN=Rhou PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.337e-41
Identity = 88/191 (46.07%), Postives = 120/191 (62.83%), Query Frame = 1
Query:  232 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFI--DHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGG-------LQPSKQKKR 762
            R +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG  V L L DTAGQ+++++LRPL Y   D+F+L FS++S  S++NV +KW+PE+R + P  PIILVGT+ DLR+D +  I  D     P+     +   E + + +YI CS+ T       F      G       LQP K K R
Sbjct:   51 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPTSFQNVGEKWVPEIRRHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEVKAVSYIECSALTQKNLKEVFDAAIVAGIQHSDSQLQPKKSKSR 241          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOU_HUMAN (Rho-related GTP-binding protein RhoU OS=Homo sapiens GN=RHOU PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.337e-41
Identity = 88/190 (46.32%), Postives = 125/190 (65.79%), Query Frame = 1
Query:  232 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFI--DHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPS---KQKKRERS 771
            R +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG  V L L DTAGQ+++++LRPL Y   D+F+L FS++S +S++NV++KW+PE+R + P  PIILVGT+ DLR+D +  I  D     P+     +   E I + +YI CS+ T       F      G+Q S   +Q K+ +S
Sbjct:   48 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKS 237          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHO1_CANAL (GTP-binding protein RHO1 OS=Candida albicans GN=RHO1 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.337e-41
Identity = 86/183 (46.99%), Postives = 121/183 (66.12%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPSKQKKRER 768
            K V VGDGA GKTC+LI ++  TFP  YVPTVF+N+ A+V VDG  V L LWDTAGQEDY+RLRPLSY  ++V ++ FS+ S  S +NV +KWI E+ H+  GVPIILVG K DLRDD      +      P++T++G++  + IG+  Y+ CS+KT       F    +  L+  ++K++++
Sbjct:   11 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRKVELALWDTAGQEDYDRLRPLSYPDSNVILICFSVDSPDSLDNVLEKWISEVLHFCQGVPIILVGCKSDLRDDPHTIEALRQQQQQPVSTSEGQQVAQRIGAADYLECSAKTGRGVREVFEAATRASLRVKEKKEKKK 193          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACH_DICDI (Rho-related protein racH OS=Dictyostelium discoideum GN=racH PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.337e-41
Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGV-PIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            IK + VGD +VGKTC+LISYT+N+FP +YVPTVFDN++AN +V+ + +NLGLWDTAG E+YN  RPLSY G DVFI+ FSLIS+ S+ENV KKW PE+      V PIILVGTKLDLR   +          +T   GE+    IG+  Y  CS+ T
Sbjct:    5 IKVMVVGDMSVGKTCLLISYTTNSFPGEYVPTVFDNYNANAIVNNTPINLGLWDTAGSEEYNSFRPLSYPGTDVFIICFSLISQTSFENVIKKWHPEIIQNMEQVPPIILVGTKLDLRGKGK-----SEEKEVTPEMGEQMRAAIGAYKYSECSALT 156          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RACE_DICDI (Rho-related protein racE OS=Dictyostelium discoideum GN=racE PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.358e-41
Identity = 84/163 (51.53%), Postives = 108/163 (66.26%), Query Frame = 1
Query:  217 QMSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHXGAVPITTAQGEEPEELIGSPAYIGCSSKT 705
            Q S +  +K V VGDGAVGKTC+LI Y  N FP DYVPTVF+N++A        + + LWDTAGQE+Y+RLRPLSY GADV +L FS IS++SYE +  KW PE+ HY P VP ILVGTK+DLR+ +    +     PIT   G   ++ I +  Y+  S+KT
Sbjct:    5 QGSGATRVKLVVVGDGAVGKTCLLICYAQNDFPVDYVPTVFENYTATRKRGNEDIKVHLWDTAGQEEYDRLRPLSYPGADVVLLCFSTISQSSYEAIRDKWAPEVNHYIPDVPSILVGTKIDLREQQHPDPNSGKFEPITADMGISMQKQIKAKKYLEVSAKT 167          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.434e-41
Identity = 87/188 (46.28%), Postives = 123/188 (65.43%), Query Frame = 1
Query:  238 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFI--DHXGAVPITTAQGEEPEELIGSPAYIGCSSKTNS-----F*CCFKGGLQPS---KQKKRERS 771
            +KCV VGDGAVGKT +++SYT+N +PT+Y+PT FDNFSA V VDG  V L L DTAGQ+++++LRPL Y  AD+F+L FS++  +S++NV++KW+PE+R + P  PIILVGT+ DLR+D +  I  D     P+         E I + +YI CS+ T       F      G+Q S   +Q K+ +S
Sbjct:   47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAAIVAGIQYSDSQQQPKKSKS 234          
BLAST of EY753602 vs. ExPASy Swiss-Prot
Match: RHOA_EMENI (GTP-binding protein rhoA OS=Emericella nidulans GN=rhoA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.709e-41
Identity = 83/158 (52.53%), Postives = 109/158 (68.99%), Query Frame = 1
Query:  241 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFF--IDHXGAVPITTAQGEEPEELIGSPAYIGCSSKTN 708
            K V VGDGA GKTC+LI ++  TFP  YVPTVF+N+ A+V VDG  V L LWDTAGQEDY+RLRPLSY  + V ++ F++ S  S +NV +KWI E+ H+  G+PIILVG K DLR D +    ++     P+T  QGEE  + IG+  Y+ CS++TN
Sbjct:    7 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPKTIEELNKTSQKPVTPEQGEEVRKKIGAYKYLECSARTN 164          
The following BLAST results are available for this feature:
BLAST of EY753602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RHOC_MOUSE1.956e-4147.03Rho-related GTP-binding protein RhoC OS=Mus muscul... [more]
RHOC_HUMAN1.956e-4147.03Rho-related GTP-binding protein RhoC OS=Homo sapie... [more]
RHOC_BOVIN1.956e-4147.03Rho-related GTP-binding protein RhoC OS=Bos taurus... [more]
RHOU_MOUSE3.337e-4146.07Rho-related GTP-binding protein RhoU OS=Mus muscul... [more]
RHOU_HUMAN3.337e-4146.32Rho-related GTP-binding protein RhoU OS=Homo sapie... [more]
RHO1_CANAL3.337e-4146.99GTP-binding protein RHO1 OS=Candida albicans GN=RH... [more]
RACH_DICDI3.337e-4155.41Rho-related protein racH OS=Dictyostelium discoide... [more]
RACE_DICDI4.358e-4151.53Rho-related protein racE OS=Dictyostelium discoide... [more]
RHOU_BOVIN7.434e-4146.28Rho-related GTP-binding protein RhoU OS=Bos taurus... [more]
RHOA_EMENI9.709e-4152.53GTP-binding protein rhoA OS=Emericella nidulans GN... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753602 ID=EY753602; Name=EY753602; organism=Citrus sinensis; type=EST; length=795bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAACTAAAAAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCGGTGACGGCGCCGTCGGAAAAACTTGCATGCTTATTTCTTACACC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTCAG
TGCGAATGTGGTTGTTGATGGGAGTACGGTCAACTTAGGGTTATGGGACA
CTGCTGGTCAGGAGGATTACAATAGATTGAGACCGTTAAGTTATAGAGGA
GCTGATGTGTTTATTCTTGCATTCTCACTGATTAGCAAGGCCAGCTATGA
AAATGTCGCCAAGAAGTGGATTCCAGAACTGAGGCACTATGCGCCCGGTG
TTCCAATAATTCTTGTTGGGACTAAGCTAGATCTTCGGGATGATAAGCAG
TTCTTTATTGATCATNCAGGTGCAGTACCAATTACTACAGCTCAGGGAGA
GGAACCTGAGGAACTGATTGGATCTCCTGCGTACATCGGATGTAGTTCAA
AGACCAACAGTTTTTGATGCTGCTTTAAAGGGGGGCTTCAGCCTTCAAAG
CAAAAGAAAAGAGAAAGAAGTCCCTAGGGCTTGCTCCTACTGTGA
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