EY753593

Overview
NameEY753593
Unique NameEY753593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: PLST_RAT (Plastin-3 OS=Rattus norvegicus GN=Pls3 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  219 HTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKAG 722
            H+ SE EK ++V  IN  L +DP  +  +P++P T+DLF    DG++LCK+IN++VP TIDERAIN K+ + P+   EN  L LNSA AIGC VVNIG +DL  G+PH                        +L+   +    L     L+P + LL+  N+H E +G
Sbjct:  119 HSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK-LTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSG 285          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: PLST_MOUSE (Plastin-3 OS=Mus musculus GN=Pls3 PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  219 HTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKAG 722
            H+ SE EK ++V  IN  L +DP  +  +P++P T+DLF    DG++LCK+IN++VP TIDERAIN K+ + P+   EN  L LNSA AIGC VVNIG +DL  G+PH                        +L+   +    L     L+P + LL+  N+H E +G
Sbjct:  119 HSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK-LTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSG 285          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: PLST_HUMAN (Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  219 HTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKAG 722
            H+ SE EK ++V  IN  L +DP  +  +P++P T+DLF    DG++LCK+IN++VP TIDERAIN K+ + P+   EN  L LNSA AIGC VVNIG +DL  G+PH                        +L+   +    L     L+P + LL+  N+H E +G
Sbjct:  119 HSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK-LTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSG 285          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: PLST_CRIGR (Plastin-3 OS=Cricetulus griseus GN=PLS3 PE=2 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  219 HTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKAG 722
            H+ SE EK ++V  IN  L +DP  +  +P++P T+DLF    DG++LCK+IN++VP TIDERAIN K+ + P+   EN  L LNSA AIGC VVNIG +DL  G+PH                        +L+   +    L     L+P + LL+  N+H E +G
Sbjct:  119 HSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK-LTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSG 285          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: PLST_BOVIN (Plastin-3 OS=Bos taurus GN=PLS3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 67/168 (39.88%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  219 HTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKAG 722
            H+ SE EK ++V  IN  L +DP  +  +P++P T+DLF    DG++LCK+IN++VP TIDERAIN K+ + P+   EN  L LNSA AIGC VVNIG +DL  G+PH                        +L+   +    L     L+P + LL+  N+H E +G
Sbjct:  119 HSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKK-LTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSG 285          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: FIMB_DICDI (Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.217e-27
Identity = 69/176 (39.20%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   45 TEEDIKGILAESYAGAGDEIDFEAFLRAYINLQ----------GRATTKPGSAKNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPH 542
            T  +++ ++ E        IDF+ FL+     +            A  K G+      +  ++ + + H+ S+ EK +Y+  IN+ L  D  LK  LP+    +  F    DG+LLCKLIN AVP TIDER +N K+ +N +  NEN  LC+NSAKAIGC VVNIG  DLVEGR H
Sbjct:   44 TGVEVRDMIKEVDTDGNGSIDFKEFLQVMQKARQHSANASPAFASAVKKVGAVNTIGGYSGSTASGVQHSYSDEEKVAYIDWINNCLAKDVDLKSRLPIPEDGDKFFAACNDGLLLCKLINDAVPDTIDERVLN-KKNLNAFRINENQVLCINSAKAIGCNVVNIGAGDLVEGRAH 218          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: FIMB_YEAST (Fimbrin OS=Saccharomyces cerevisiae GN=SAC6 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.246e-23
Identity = 74/231 (32.03%), Postives = 108/231 (46.75%), Query Frame = 3
Query:   51 EDIKGILA---ESYAGAGDEIDFEAFLRAYINLQGRAT--TKPGSAKNSSSFLKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAIN---TKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKA 719
            +D  G++A   ES  GA  +  F     +   +   AT     G    +   +  S T   HTI+E E+  +  HINS L  D  +   LP    T  LFD  +DG++L KLIN +VP TID R +N     + +N ++ +EN  + +NSAKAIGC VVN+ ++D++EGR H                       P L    +    L     L P + LL+  NYH ++A
Sbjct:   74 DDYVGLVAKLRESKTGAAPQTTFNVAPNSTPIVSTAATGLQHKGKGTQAKIIVAGSQTGTTHTINEEERREFTKHINSVLAGDQDIGDLLPFPTDTFQLFDECRDGLVLSKLINDSVPDTIDTRVLNWPKKGKELNNFQASENANIVINSAKAIGCVVVNVHSEDIIEGREHLILGLIWQIIRRGLLSKIDIKLHPELYRLLEDDETLEQFLRLPPEQILLRWFNYHLKQA 304          
BLAST of EY753593 vs. ExPASy Swiss-Prot
Match: FIMB_SCHPO (Fimbrin OS=Schizosaccharomyces pombe GN=fim1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.799e-22
Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 3
Query:  192 LKASTTTLLHTISESEKASYVAHINSYLGDDPFLKQFLPLDPTTNDLFDLAKDGVLLCKLINIAVPGTIDERAINTKRVINPWER---NENHTLCLNSAKAI-GCTVVNIGTQDLVEGRPHXXXXXXXXXXXXXXXXXXXXXXTPSLSNWWKTTAMLRSSWGLAPGKGLLKRVNYHPEKAGI*KALHKF 746
            +K S++++ HTI+E E+  ++ HINS L  DP +   +P++  T + FD  KDG++L KLIN +VP TIDER +N +R   P +     EN+ + +NSAKA+ G ++ NIG  D++EGR H                       P L    +    L     L P K LL+  NYH + A   + +  F
Sbjct:   99 IKGSSSSVSHTINEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPLDNFKCIENNNVVINSAKAMGGISITNIGAGDILEGREHLILGLVWQIIRRGLLGKIDITLHPELYRLLEEDETLDQFLRLPPEKILLRWFNYHLKAANWPRTVSNF 287          
The following BLAST results are available for this feature:
BLAST of EY753593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PLST_RAT9.217e-2739.88Plastin-3 OS=Rattus norvegicus GN=Pls3 PE=2 SV=2[more]
PLST_MOUSE9.217e-2739.88Plastin-3 OS=Mus musculus GN=Pls3 PE=1 SV=3[more]
PLST_HUMAN9.217e-2739.88Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4[more]
PLST_CRIGR9.217e-2739.88Plastin-3 OS=Cricetulus griseus GN=PLS3 PE=2 SV=3[more]
PLST_BOVIN9.217e-2739.88Plastin-3 OS=Bos taurus GN=PLS3 PE=2 SV=1[more]
FIMB_DICDI9.217e-2739.20Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 S... [more]
FIMB_YEAST1.246e-2332.03Fimbrin OS=Saccharomyces cerevisiae GN=SAC6 PE=1 S... [more]
FIMB_SCHPO1.799e-2234.39Fimbrin OS=Schizosaccharomyces pombe GN=fim1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-F07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753593 ID=EY753593; Name=EY753593; organism=Citrus sinensis; type=EST; length=874bp
TGCCATTTGTGATGGCAAAATTGAAGGCTTTTCCTACAATGTTCACCGAG
GAAGATATCAAGGGGATCTTGGCTGAGTCGTATGCTGGCGCTGGTGATGA
GATTGATTTTGAAGCCTTTCTCAGGGCATATATAAATTTGCAAGGCCGAG
CTACCACAAAACCGGGAAGTGCAAAGAACTCTTCATCATTTCTTAAGGCT
TCCACAACCACCCTTCTTCATACAATCAGTGAATCAGAGAAAGCATCTTA
TGTTGCTCACATAAACAGCTATCTTGGGGATGATCCTTTCCTGAAGCAGT
TTCTTCCTTTAGACCCAACTACAAATGATTTGTTTGATCTTGCGAAAGAT
GGAGTTCTTCTATGTAAGCTGATCAATATTGCTGTGCCGGGAACAATAGA
TGAAAGAGCTATCAACACAAAACGGGTAATCAACCCATGGGAGAGGAATG
AGAACCACACTCTTTGCCTAAACTCTGCAAAGGCCATTGGCTGTACTGTG
GTTAACATTGGTACACAAGATCTGGTTGAAGGAAGGCCTCATCTGATTCT
AGGGTTGATTTTCCAAATCATAAAGATCCAACTATTANCAGATCTCAATC
TTAAAAAGACCCCCAGCTTGTCGAATTGGTGGAAGACAACAGCGATGTTG
AGGAGCTCATGGGGATTAGCTCCTGGAAAAGGCCTACTAAAAAGGGTGAA
TTACCATCCTGAAAAGGCAGGGATATGAAAAGCCTTGCACAAATTTTTTT
TCCCACTGGAAGGATGGGAAGGCCTAAACATACCTGGTAATAGGTTCTGG
ACCAAAAAACTGGAATCCCCTTCCTGGGTTATGAGGGATCCCATGAAAGG
CCTAAATGGTCCTTGTCTTGCCGA
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