EY753556

Overview
NameEY753556
Unique NameEY753556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC9_ARATH (Rac-like GTP-binding protein ARAC9 OS=Arabidopsis thaliana GN=ARAC9 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.944e-20
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 1
Query:  223 SASRFIKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            +A+ FIKCVTV DGAVGKTC+L SY SNTFPTDYVPTVFDN +ANV+V G  VN  +WDT G
Sbjct:   14 TATTFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAG 75          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC8_ARATH (Rac-like GTP-binding protein ARAC8 OS=Arabidopsis thaliana GN=ARAC8 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19
Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  223 SASRFIKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            SAS+FIKCVTV DGAVGKTC+L  Y SN FPTDY+PTVFDN S NVVV G  VN  +WDT G
Sbjct:    4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDTAG 65          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC1_ORYSJ (Rac-like GTP-binding protein 1 OS=Oryza sativa subsp. japonica GN=RAC1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19
Identity = 44/62 (70.97%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  223 SASRFIKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            +A+RFIKCVTV DGAVGKTC+L  Y  N FPTDY+PTVFDN SANV V GS VN  +WDT G
Sbjct:    6 AATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAG 67          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC2_ORYSJ (Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica GN=RAC2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.310e-18
Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 1
Query:  226 ASRFIKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            A++FIKCVTV DGAVGKTC+L  Y SN FPTDY+PTVFDN SANV V G+ VN  +WDT G
Sbjct:    4 ATKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAG 64          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC3_MOUSE (Ras-related C3 botulinum toxin substrate 3 OS=Mus musculus GN=Rac3 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP +Y+PTVFDN SANV+V G PVN  +WDT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC3_HUMAN (Ras-related C3 botulinum toxin substrate 3 OS=Homo sapiens GN=RAC3 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP +Y+PTVFDN SANV+V G PVN  +WDT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC1_RAT (Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus GN=Rac1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP +Y+PTVFDN SANV+V G PVN  +WDT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC1_MOUSE (Ras-related C3 botulinum toxin substrate 1 OS=Mus musculus GN=Rac1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP +Y+PTVFDN SANV+V G PVN  +WDT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC1_HUMAN (Ras-related C3 botulinum toxin substrate 1 OS=Homo sapiens GN=RAC1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP +Y+PTVFDN SANV+V G PVN  +WDT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60          
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RAC1_CANFA (Ras-related C3 botulinum toxin substrate 1 OS=Canis familiaris GN=RAC1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP +Y+PTVFDN SANV+V G PVN  +WDT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60          
The following BLAST results are available for this feature:
BLAST of EY753556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
RAC9_ARATH6.944e-2072.58Rac-like GTP-binding protein ARAC9 OS=Arabidopsis ... [more]
RAC8_ARATH2.020e-1972.58Rac-like GTP-binding protein ARAC8 OS=Arabidopsis ... [more]
RAC1_ORYSJ5.879e-1970.97Rac-like GTP-binding protein 1 OS=Oryza sativa sub... [more]
RAC2_ORYSJ1.310e-1870.49Rac-like GTP-binding protein 2 OS=Oryza sativa sub... [more]
RAC3_MOUSE7.186e-1768.42Ras-related C3 botulinum toxin substrate 3 OS=Mus ... [more]
RAC3_HUMAN7.186e-1768.42Ras-related C3 botulinum toxin substrate 3 OS=Homo... [more]
RAC1_RAT7.186e-1768.42Ras-related C3 botulinum toxin substrate 1 OS=Ratt... [more]
RAC1_MOUSE7.186e-1768.42Ras-related C3 botulinum toxin substrate 1 OS=Mus ... [more]
RAC1_HUMAN7.186e-1768.42Ras-related C3 botulinum toxin substrate 1 OS=Homo... [more]
RAC1_CANFA7.186e-1768.42Ras-related C3 botulinum toxin substrate 1 OS=Cani... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-C02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753556 ID=EY753556; Name=EY753556; organism=Citrus sinensis; type=EST; length=778bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAGCTGGGGAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCTGTGACGGCGCCGTCGGAAAAACTTGCGTGCTTACTTCTTACGCC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTGAG
TGCGAATGTGGTTGTTGGTGGGAGTCCGGTCAACTCGTGGGTTTGGGACA
CTGTTGGTTTGTGAGATTCCCAGTGGTGGAGATCGNGGGTTTTTGTGGTA
GTTTTGCGGGTTACTTGGTTCGTGCTGCTTTCTCGGGCGTGTTGCGATTG
TTCTGGAGATTGTGTGCTTGGCGGCGTGCTTCGGGCCGCGGCGGCGGCGT
TTTTGGGCGGCGGGCGTGCATTTTTGTTTCCGTCTGTCGATATTGTTTTC
TGTGTGGCGCTCTGCCCCCCCCTCCCCTCCTTTCTCCGCCGGGGCGACGT
CATGTCCTGCCCCCCCCTCCTTCGCTCCGCCCGCCGCGCTCCCCGTGCTC
GNCGCNTTTCTGTACTTCCGTCCTCTCCCTCGGGAATTATTTAACTCCCT
TCTCTTTTTTCTTCCCTGTCTCGCCGCT
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