EY753556

Overview
NameEY753556
Unique NameEY753556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_PIG (Cell division control protein 42 homolog OS=Sus scrofa GN=CDC42 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_MOUSE (Cell division control protein 42 homolog OS=Mus musculus GN=Cdc42 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_HUMAN (Cell division control protein 42 homolog OS=Homo sapiens GN=CDC42 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_DROPS (Cdc42 homolog OS=Drosophila pseudoobscura pseudoobscura GN=Cdc42 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_DROME (Cdc42 homolog OS=Drosophila melanogaster GN=Cdc42 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_CHICK (Cell division control protein 42 homolog OS=Gallus gallus GN=CDC42 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_CANFA (Cell division control protein 42 homolog OS=Canis familiaris GN=CDC42 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_CAEEL (Cell division control protein 42 homolog OS=Caenorhabditis elegans GN=cdc-42 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_BOVIN (Cell division control protein 42 homolog OS=Bos taurus GN=CDC42 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: CDC42_ANOGA (Cdc42 homolog OS=Anopheles gambiae GN=Cdc42 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.694e-14
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IKCV V DGAVGKTC+L SY +N FP++YVPTVFDN +  V++GG P    ++DT G
Sbjct:    4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
The following BLAST results are available for this feature:
BLAST of EY753556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
CDC42_PIG5.694e-1459.65Cell division control protein 42 homolog OS=Sus sc... [more]
CDC42_MOUSE5.694e-1459.65Cell division control protein 42 homolog OS=Mus mu... [more]
CDC42_HUMAN5.694e-1459.65Cell division control protein 42 homolog OS=Homo s... [more]
CDC42_DROPS5.694e-1459.65Cdc42 homolog OS=Drosophila pseudoobscura pseudoob... [more]
CDC42_DROME5.694e-1459.65Cdc42 homolog OS=Drosophila melanogaster GN=Cdc42 ... [more]
CDC42_CHICK5.694e-1459.65Cell division control protein 42 homolog OS=Gallus... [more]
CDC42_CANFA5.694e-1459.65Cell division control protein 42 homolog OS=Canis ... [more]
CDC42_CAEEL5.694e-1459.65Cell division control protein 42 homolog OS=Caenor... [more]
CDC42_BOVIN5.694e-1459.65Cell division control protein 42 homolog OS=Bos ta... [more]
CDC42_ANOGA5.694e-1459.65Cdc42 homolog OS=Anopheles gambiae GN=Cdc42 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-C02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753556 ID=EY753556; Name=EY753556; organism=Citrus sinensis; type=EST; length=778bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAGCTGGGGAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCTGTGACGGCGCCGTCGGAAAAACTTGCGTGCTTACTTCTTACGCC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTGAG
TGCGAATGTGGTTGTTGGTGGGAGTCCGGTCAACTCGTGGGTTTGGGACA
CTGTTGGTTTGTGAGATTCCCAGTGGTGGAGATCGNGGGTTTTTGTGGTA
GTTTTGCGGGTTACTTGGTTCGTGCTGCTTTCTCGGGCGTGTTGCGATTG
TTCTGGAGATTGTGTGCTTGGCGGCGTGCTTCGGGCCGCGGCGGCGGCGT
TTTTGGGCGGCGGGCGTGCATTTTTGTTTCCGTCTGTCGATATTGTTTTC
TGTGTGGCGCTCTGCCCCCCCCTCCCCTCCTTTCTCCGCCGGGGCGACGT
CATGTCCTGCCCCCCCCTCCTTCGCTCCGCCCGCCGCGCTCCCCGTGCTC
GNCGCNTTTCTGTACTTCCGTCCTCTCCCTCGGGAATTATTTAACTCCCT
TCTCTTTTTTCTTCCCTGTCTCGCCGCT
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