EY753556

Overview
NameEY753556
Unique NameEY753556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.025e-11
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            +KCV V DGAVGKT ++ SY +N +PT+Y+PT FDN SA V V G PV   + DT G
Sbjct:   47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAG 103
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RACE_DICDI (Rho-related protein racE OS=Dictyostelium discoideum GN=racE PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.645e-11
Identity = 33/64 (51.56%), Postives = 40/64 (62.50%), Query Frame = 1 
Query:  217 QMSASRFIKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            Q S +  +K V V DGAVGKTC+L  YA N FP DYVPTVF+N +A    G   +   +WDT G
Sbjct:    5 QGSGATRVKLVVVGDGAVGKTCLLICYAQNDFPVDYVPTVFENYTATRKRGNEDIKVHLWDTAG 68
[Close]
BLAST of EY753556 vs. ExPASy Swiss-Prot
Match: RACC_ENTHI (Rho-related protein racC OS=Entamoeba histolytica GN=RACC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 30/57 (52.63%), Postives = 37/57 (64.91%), Query Frame = 1 
Query:  238 IKCVTVCDGAVGKTCVLTSYASNTFPTDYVPTVFDNLSANVVVGGSPVNSWVWDTVG 408
            IK V V DGAVGKTC+L  Y +N FP DY+PTVFDN   ++  G   +   +WDT G
Sbjct:    8 IKLVVVGDGAVGKTCLLICYTTNEFPKDYIPTVFDNYVVSLTAGTRQIQLALWDTAG 64
The following BLAST results are available for this feature:
BLAST of EY753556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
RHOU_BOVIN2.025e-1156.14Rho-related GTP-binding protein RhoU OS=Bos taurus... [more]
RACE_DICDI2.645e-1151.56Rho-related protein racE OS=Dictyostelium discoide... [more]
RACC_ENTHI7.696e-1152.63Rho-related protein racC OS=Entamoeba histolytica ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-C02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753556 ID=EY753556; Name=EY753556; organism=Citrus sinensis; type=EST; length=778bp
CTGTCTCTTTGCAGATTAGGGTTTAATTACCTTCGCTACCTTAATTCAAG
ACTTCTTTTCACTCAATTCCTAAGCTCCCGTTGACGAACTGAGTTGTTCT
CTTTTGGTCTTCGAAATGAGTGAAGTCTGAGGCAAGAAGTGTACGTAAAG
AACCTGAGCAGTCTTCCAAGGGCATTGTCGGAATAAGCTGGGGAAGAGAA
TAGAGATCTGGTGGCGCAAATGAGCGCGTCGAGGTTCATAAAGTGCGTCA
CTGTCTGTGACGGCGCCGTCGGAAAAACTTGCGTGCTTACTTCTTACGCC
AGCAACACTTTCCCAACGGACTATGTGCCAACTGTCTTTGACAATTTGAG
TGCGAATGTGGTTGTTGGTGGGAGTCCGGTCAACTCGTGGGTTTGGGACA
CTGTTGGTTTGTGAGATTCCCAGTGGTGGAGATCGNGGGTTTTTGTGGTA
GTTTTGCGGGTTACTTGGTTCGTGCTGCTTTCTCGGGCGTGTTGCGATTG
TTCTGGAGATTGTGTGCTTGGCGGCGTGCTTCGGGCCGCGGCGGCGGCGT
TTTTGGGCGGCGGGCGTGCATTTTTGTTTCCGTCTGTCGATATTGTTTTC
TGTGTGGCGCTCTGCCCCCCCCTCCCCTCCTTTCTCCGCCGGGGCGACGT
CATGTCCTGCCCCCCCCTCCTTCGCTCCGCCCGCCGCGCTCCCCGTGCTC
GNCGCNTTTCTGTACTTCCGTCCTCTCCCTCGGGAATTATTTAACTCCCT
TCTCTTTTTTCTTCCCTGTCTCGCCGCT
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