EY753528

Overview
NameEY753528
Unique NameEY753528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.116e-19
Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            LP +D+FVTTAD   EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P  YF
Sbjct:  167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            L  VD+FV  ADA  EPP+ T NTVLS+LA DYP   +ACYV DD    L F SL EA+ FA+ W+PFC+++ V+ RAP  YF
Sbjct:  124 LAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYF 206          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            LP +D+FVTTAD   EP + T N++LS+LA DYPV +  CY+SDD+   L + ++ EA+KFA LWVPFC+K+ ++ R P  YF
Sbjct:  183 LPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYF 265          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.690e-18
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 1
Query:  421 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 669
            LP +D+F+ T D   EP + T+N++LS+LA DYP  + A Y+SDD  S  ++  L+E ++FA LWVPFC+K+ V+ RAP  YF
Sbjct:  151 LPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYF 233          
BLAST of EY753528 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1
Query:  529 KLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMR 732
            +LACYVSDD CSP+ +Y+L EA+ FA+ WVPFC+++ V +RAPFRYF               DW  M+
Sbjct:  173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEFGPADRKFLDDWTFMK 240          
The following BLAST results are available for this feature:
BLAST of EY753528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLF3_ORYSI1.116e-1954.22Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CESAB_ORYSJ1.904e-1955.42Putative cellulose synthase A catalytic subunit 11... [more]
CSLF6_ORYSJ5.540e-1951.81Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLF9_ORYSJ4.690e-1848.19Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLH3_ORYSJ4.109e-1448.53Putative cellulose synthase-like protein H3 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-H07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753528 ID=EY753528; Name=EY753528; organism=Citrus sinensis; type=EST; length=883bp
AAAAAAAAATAACGAGTACTTGTTTTTCAAGCTCATGGCCAATACAAAGT
CGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAAAAACACATATCAT
AGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCTTCTA
TCGGCTCTCAACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCTTTTC
TATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCATCGTCAACTGCAAG
TGGACTCCTTTGACCTACAAAACATATCCCCAACGTCTCCAAGAAAGGTA
ACAAATCAAATAACGTTAGCATTAATAATTTCCGCATCATTTGCAATTGT
CTTTGTCATTTTGCAAGTTACTACACACACACACACACACACATGTGTAC
GACTCAACAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTGACAACT
GCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGTGCTGTC
TTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTG
ATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAA
TTCGCTAAGCTTTGGGTTCCATTCTGTAAAAAGTATAATGTTCAAATTAG
AGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGTTCAG
GGGAACTCCTGCAAGACTGGAAAAACATGAGGGAGAATGACTGTTTTCTC
CATACAGAACGCTGAATATCCAACATAGTGAAGGTATATNCGAGACAAAG
AGGTCTCTCAGAGAGATCCCATTTAGTTACTATCAGAGAGAAAAGGCCAA
GCTCCCATACTACAACAGGGCCCTGATGATTGC
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