EY753518

Overview
NameEY753518
Unique NameEY753518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753518 vs. ExPASy Swiss-Prot
Match: IF5A_SULIK (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 2
Query:  173 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 496
            G ++   Y+VI G PC+VVEV+ +KTGKHG AK + V I +F+G K   + P     +VP + +   Q+I    D    +  E   T  ++  PT++ L S+I+   E
Sbjct:    9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115          
BLAST of EY753518 vs. ExPASy Swiss-Prot
Match: IF5A_SULIA (Translation initiation factor 5A OS=Sulfolobus islandicus (strain M.16.27) GN=eIF5A PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 2
Query:  173 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 496
            G ++   Y+VI G PC+VVEV+ +KTGKHG AK + V I +F+G K   + P     +VP + +   Q+I    D    +  E   T  ++  PT++ L S+I+   E
Sbjct:    9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGDKIQVMDLETYET-FEIEKPTEDELASKIRPNAE 115          
BLAST of EY753518 vs. ExPASy Swiss-Prot
Match: IF5A_SULSO (Translation initiation factor 5A OS=Sulfolobus solfataricus GN=eif5a PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 38/108 (35.19%), Postives = 60/108 (55.56%), Query Frame = 2
Query:  173 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 496
            G ++   Y+VI G PC+VVEV+ +KTGKHG AK + V I +F+G K   + P     +VP + +   Q+I    +    +  E+  T  ++  PT++ L S+IK   E
Sbjct:    9 GELKVGSYVVIDGEPCRVVEVTKAKTGKHGSAKANVVAIGVFSGAKKTLMAPVDQQVEVPIIEKHIGQIIADMGNKIQVMDLESYET-FEIEKPTEDELASKIKPNAE 115          
BLAST of EY753518 vs. ExPASy Swiss-Prot
Match: IF5A_METJA (Translation initiation factor 5A OS=Methanocaldococcus jannaschii GN=eif5a PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 2
Query:  173 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDL 511
            G+++   Y++I G PC++V++S SK GKHG AK   VGI IF   K E + P+S   +VP + R   Q++ I  D  V ++  +  T + L LP  E +     +G E G ++
Sbjct:   10 GSLKVGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVPIIDRRKGQVLAIMGD-MVQIM--DLQTYETLELPIPEGI-----EGLEPGGEV 114          
BLAST of EY753518 vs. ExPASy Swiss-Prot
Match: YE034_YEAST (Putative uncharacterized protein YEL034C-A OS=Saccharomyces cerevisiae GN=YEL034C-A PE=5 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11
Identity = 53/189 (28.04%), Postives = 89/189 (47.09%), Query Frame = -1
Query:   41 HSRSSKSLLLGANVLQGIDLLLSHSTLN*DNQIFPTLKSILDL*KQIFISWKSQVILGIAILSQQANKSILRDINQLVVSASDMRNITVVGRGNNILKLLAIEDVNSYKVTLSMTVXXXXXXXXXXXLARTTFDDDITVFADGSGLLRKCLGGAGVGL-RLKVVLFVRHIVWFLRFTIRASTTKFW*KK 604
            H+     L+  ++ L+G     +HS  + ++Q+   +KS L    Q F  W   +IL + +   Q  ++++ ++ QLV  + D  N  VV R   I +LL  ED+N  ++  S+TV           L  +T DD+ TV + G  L    +GG G  +   K + FVRH ++ L F     +   W +K
Sbjct:   16 HAMMLTGLIGSSSFLEGDGGFFTHSGDDGNHQVLTFIKSSLQTVTQ-FTFWSLDIILSVTVHVHQRQETVI-NVQQLVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLSQGRTL--HWVGGGGTSVSSFKGMFFVRHCIYELVFVCVWESMSNWLQK 200          
The following BLAST results are available for this feature:
BLAST of EY753518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
IF5A_SULIK5.366e-1135.19Translation initiation factor 5A OS=Sulfolobus isl... [more]
IF5A_SULIA5.366e-1135.19Translation initiation factor 5A OS=Sulfolobus isl... [more]
IF5A_SULSO7.008e-1135.19Translation initiation factor 5A OS=Sulfolobus sol... [more]
IF5A_METJA7.008e-1135.40Translation initiation factor 5A OS=Methanocaldoco... [more]
YE034_YEAST9.153e-1128.04Putative uncharacterized protein YEL034C-A OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-G07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753518 ID=EY753518; Name=EY753518; organism=Citrus sinensis; type=EST; length=865bp
TGCCGGNATTCAAGGCCCGACCCACGCGTCCGGGTATAGTTTTTTTCTAC
CAAAATTTGGTTGTCGACGCTCTAATTGTGAATCGCAGGAACCAGACGAT
ATGTCGGACGAAGAGCACCACTTTGAGTCGAAGGCCGACGCCGGCGCCTC
CAAGACATTTCCTCAGCAGGCCGGAACCATCCGCAAAAACGGTTATATCG
TCATCAAAGGTCGTCCTTGCAAGGTTGTTGAGGTTTCAACTTCCAAGACT
GGAAAGCACGGTCATGCTAAGTGTCACTTTGTAGGAATTGACATCTTCAA
TGGCAAGAAGCTTGAGGATATTGTTCCCTCTTCCCACAACTGTGATGTTC
CTCATGTCACTCGCACTGACTACCAGCTGATTGATATCTCTGAGGATGGA
TTTGTTAGCCTGCTGACTGAGAATGGCAATACCAAGGATGACCTGAGACT
TCCAACTGATGAAAATCTGCTTTCACAGATCAAGGATGGATTTGAGAGTG
GGAAAGATCTGGTTGTCTCAGTTCAGTGTGCTATGGGAGAGGAGCAGATC
AATGCCCTGAAGGACATTGGCCCCAAGTAAAAGACTTTTGCTTGATCGAG
AATGCAGATTGCTGAAAGCTGTGGGAAGGTGGATAGTAGTGTAGCTTTAC
TGGTGTCCGGTTTCAAGATGAATGCCATCATTTCATATAAAATGACTCTT
ACCATATTATTAATTGTTTTCTATCGACAGTATTTTTATTCTGGTTGATT
GCTTGAAAGTTGAACATGGTTGTTCTCGGTGTGCAGAAGTTGTATCCGCC
AACGTGACTGTATATCACTTCGAAGCACCTTTTGTTGTTTCAAACATCCA
TTTACAGCTTCGTGG
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