EY753472

Overview
NameEY753472
Unique NameEY753472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_FLAPJ (Probable GTP-binding protein engB OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=engB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.939e-32
Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEF+ S+     CP + LPE+A +GRSNVGKSSL+N L   K LA TS  P KTQ INHF+IN++W+LVDLPGYGYA   ++ +  + +F  DYF  R  LV  F+LID    A+ IDLE+ ++LG+ ++P
Sbjct:    2 KINTAEFIISNSIVSLCPQEHLPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQLINHFKINNNWFLVDLPGYGYAKVSKKTKEVFQQFITDYFEKREQLVCAFVLIDIRHEAQKIDLEFITYLGEIELP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CHLT3 (Probable GTP-binding protein engB OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=engB PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.009e-30
Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWL 818
            ++  AEF KS  R ED P DGLPE A  GRSNVGKSSL+N+L+ +K LA  S TP KT+ IN F +N  +Y VDLPGYG+A   + L+ +W +  + Y  +R+ L  + LLID+  PA PIDLE   +L
Sbjct:    2 KIESAEFYKSVTRLEDLPKDGLPEIAFAGRSNVGKSSLMNTLMGKKDLARASATPGKTREINFFLVNGKYYFVDLPGYGFAKVSKSLQENWQQLMEGYLKSRAELKLIVLLIDSRHPALPIDLEMNEFL 130          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_AMOA5 (Probable GTP-binding protein engB OS=Amoebophilus asiaticus (strain 5a2) GN=engB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.007e-29
Identity = 64/134 (47.76%), Postives = 85/134 (63.43%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            + +A FV SS   + CP     E A +GRSNVGKSSL+N ++ +KKLA TS  P KTQ INHF +N  +YLVDLPGYG+A A +  R  W+K    Y L R  L  +F+L+D  +P + IDL + ++L  N IP
Sbjct:    3 IQEAIFVTSSATYKKCPPADKAEIAFIGRSNVGKSSLVNMILGQKKLAKTSARPGKTQLINHFLVNQKYYLVDLPGYGWAQASKTQRIGWNKMVNQYLLYRENLACLFVLLDIRLPPQKIDLLFINFLIDNDIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_CYTH3 (Probable GTP-binding protein engB OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=engB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.621e-29
Identity = 64/131 (48.85%), Postives = 81/131 (61.83%), Query Frame = 3
Query:  444 AEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            A+F+ S    + CP    PE+A +GRSNVGKSSL+NSL   K LA+TS  P KTQ IN F I ++W L DLPGYG+A A +  R  W +   DY  NR+ L +VFLL+D+       DLE  +WL  N IP
Sbjct:    5 AKFISSYDDYQKCPEITKPEYAFIGRSNVGKSSLINSLTGVKNLAMTSSKPGKTQLINLFTIEETWILADLPGYGFAKASQSSRIKWGRMVHDYLKNRTNLTTVFLLVDSRHEPMKSDLEQITWLASNGIP 135          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_PELPD (Probable GTP-binding protein engB OS=Pelobacter propionicus (strain DSM 2379) GN=engB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.785e-28
Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            +V +AEF+KS+V+ +D P + LPE A VGRSNVGKSSL+N L  RK L  TS TP +TQ IN F IN    LVDLPGYGYA AP ++R  W    + Y   R  L +V L++D        DL+   WL    IP
Sbjct:    2 EVIKAEFIKSAVKPKDYPLETLPEVAFVGRSNVGKSSLINVLANRKSLVRTSSTPGRTQLINFFDINGVLTLVDLPGYGYAKAPPDVRKQWGPMIETYLARRGNLRAVVLILDIRRIPSDGDLQMLGWLETYDIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_HELMI (Probable GTP-binding protein engB OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=engB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.785e-28
Identity = 64/134 (47.76%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 833
            ++ +AEFV S+V+ E  P D LPE ALVGRSNVGKSSL+N L  R+ LA TS TP KTQ +N +RIN + Y+VDLPGYGYA+  +  R  W    + Y   R  L  V  L+D   P    D+    WL   +I
Sbjct:    2 KIKEAEFVISAVKGEQYPEDNLPEVALVGRSNVGKSSLINKLCNRRHLARTSSTPGKTQTLNFYRINQAAYIVDLPGYGYASVSKTQRASWGPMMEHYLKKRLQLRGVIQLVDIRHPPTKDDIAMREWLNHFKI 135          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_PELTS (Probable GTP-binding protein engB OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=engB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.101e-27
Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++  AEF+ S+ +T D P+  +PE AL GRSNVGKSSLLN LV RK LA  S TP +T+ IN F +N  + LVDLPGYGYA      R  W +  ++Y   R  L  V LL+D+  P   +D++   WL    IP
Sbjct:    2 KIKNAEFITSAAKTADYPAGNIPEVALAGRSNVGKSSLLNRLVNRKSLARISSTPGRTRLINFFLVNGLFRLVDLPGYGYAKVSARERQGWRRMVEEYLKTRENLKGVVLLVDSRHPPTVLDVQMYEWLKYQGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_FUSNN (Probable GTP-binding protein engB OS=Fusobacterium nucleatum subsp. nucleatum GN=engB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.453e-27
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSD-GLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQI 833
            ++ +A+FVKS+V  +D P      EFA VGRSNVGKSSL+NSL  R KLA TSKTP +TQ IN+F IND +Y+VDLPGYG+A  P+E++  W +  + Y  ++   + VF+L+D        D+E   WL  N++
Sbjct:    2 KIKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKL-VFVLLDIRRVPSDEDIEMLEWLEYNEM 135          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_HALOH (Probable GTP-binding protein engB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=engB PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27
Identity = 60/135 (44.44%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  432 QVAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            ++    FV S+   +D P+   PEFA  GRSNVGKSSL+N+LV R+KLA TS  P +TQ IN F I+D +YLVDLPGYG+A  PR+++ +W +  + Y  NR  L  +  ++DA       DL    W+  + IP
Sbjct:    2 KIKNPRFVISAYDFDDFPTHNWPEFAFSGRSNVGKSSLINTLVNRRKLARTSSRPGRTQSINFFNIDDRFYLVDLPGYGFANVPRKVKEEWGRLIEGYLNNRPNLAGIVQIVDARHKPTRDDLMMVDWIKASGIP 136          
BLAST of EY753472 vs. ExPASy Swiss-Prot
Match: ENGB_GEOTN (Probable GTP-binding protein engB OS=Geobacillus thermodenitrificans (strain NG80-2) GN=engB PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.466e-27
Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 3
Query:  435 VAQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKTPXKTQCINHFRINDSWYLVDLPGYGYAAAPRELRTDWDKFTKDYFLNRSTLVSVFLLIDASIPAKPIDLEYASWLGQNQIP 836
            + +AE V S+V+ E  P  G PE AL GRSNVGKSS +N ++ RK LA TS  P KTQ +N + INDS+Y VD+PGYG+A   ++ R  W K  + YF  R TL +  LL+D   P    D+    +    +IP
Sbjct:    3 ITKAELVISAVKPEQYPDSGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLINDSFYFVDVPGYGFARVSKQERQKWGKMMETYFTTRETLKAALLLVDLRHPPTKDDVMMYEFFKHYEIP 136          
The following BLAST results are available for this feature:
BLAST of EY753472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENGB_FLAPJ1.939e-3249.63Probable GTP-binding protein engB OS=Flavobacteriu... [more]
ENGB_CHLT39.009e-3050.39Probable GTP-binding protein engB OS=Chloroherpeto... [more]
ENGB_AMOA52.007e-2947.76Probable GTP-binding protein engB OS=Amoebophilus ... [more]
ENGB_CYTH32.621e-2948.85Probable GTP-binding protein engB OS=Cytophaga hut... [more]
ENGB_PELPD3.785e-2848.89Probable GTP-binding protein engB OS=Pelobacter pr... [more]
ENGB_HELMI3.785e-2847.76Probable GTP-binding protein engB OS=Heliobacteriu... [more]
ENGB_PELTS1.101e-2745.93Probable GTP-binding protein engB OS=Pelotomaculum... [more]
ENGB_FUSNN2.453e-2747.41Probable GTP-binding protein engB OS=Fusobacterium... [more]
ENGB_HALOH3.204e-2744.44Probable GTP-binding protein engB OS=Halothermothr... [more]
ENGB_GEOTN5.466e-2744.78Probable GTP-binding protein engB OS=Geobacillus t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-B12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753472 ID=EY753472; Name=EY753472; organism=Citrus sinensis; type=EST; length=879bp
ATTCCAAGACCGACCCACGCGTCCGAAAATAATCTTGTCTTTCCCCATTC
GTCACAGCACCGCAGCAGCGAAGACATGGCCACTCAAAATCTCTTGTAAT
CGAAAACCGCACACACAGAAAAATGCTTTTTTCTCAGCTTCCAAGACTCA
ACTTTTCAATATTCGTAAAGCCACCCCTGTCTCTCCGCTCACACTTCACC
CTCTTACCAAAACACAGGCTCAACTTCTCAGCGCTCAAATCCACACTCTC
CACAACCGAACCGATACCCATATCCCACGCGGTAGAACCAGAACCAGAAC
CCCACGTGGCAATATCACTCGAAAAGCTATTTGTCCCGCCGGAAACAGAG
GTCTCAATCGATGATTCGTCGTTGAGTACGAGAATATTGAAGGGTTCGAA
CATAGTGTTGAGTAAGTACGCAAGGGATGCTCAAGTTGCACAAGCTGAGT
TCGTGAAGAGTAGTGTTAGGACTGAGGATTGCCCCTCTGATGGGTTGCCT
GAATTTGCGCTGGTGGGCAGGTCTAATGTTGGCAAATCTTCGCTTCTTAA
TTCACTTGTTAGAAGGAAGAAGCTTGCTCTCACATCTAAGACACCTGNGA
AAACACAATGCATCAATCATTTTCGGATAAATGATAGTTGGTACTTGGTG
GATTTGCCTGGATATGGGTATGCAGCTGCTCCTCGGGAACTTCGAACCGA
CTGGGACAAATTCACTAAAGACTATTTCCTTAATCGCTCAACTTTGGTCT
CAGTGTTCCTTCTCATAGATGCTAGCATTCCTGCAAAACCTATTGATCTT
GAATATGCTAGTTGGCTGGGACAGAATCAGATTCCATGACATTAGTCTTC
ACCAATGCGACAAGCGGAAGAAGAAAAGA
back to top