EY753463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_SYNS3 (50S ribosomal protein L28 OS=Synechococcus sp. (strain CC9311) GN=rpmB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13 Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TG ++N VS S+ +T K Q NLQ +++WW GKR++ LR++T+ALKTI+K GL A A+ I+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGKRWINLRITTRALKTIQKKGLGAYARSLGINLAK 77
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_SYNS9 (50S ribosomal protein L28 OS=Synechococcus sp. (strain CC9902) GN=rpmB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TG ++N VS S+ +T K Q NLQ +++WW G R++KLR++T+ALKTI+K GL AK I+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQQRRLWWAEGNRWIKLRVTTRALKTIQKKGLGPYAKSLGINLAK 77
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_SYNPX (50S ribosomal protein L28 OS=Synechococcus sp. (strain WH8102) GN=rpmB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TG ++N VS S+ +T K Q NLQ +++WW GKR+V LR++T+ALKTI+K GL AK I+L K Sbjct: 3 RVCQLTGTRANNGMAVSHSHIRTKKLQQANLQNRRLWWAEGKRWVNLRVTTRALKTIQKKGLGPYAKSLGINLAK 77
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_GLOVI (50S ribosomal protein L28 OS=Gloeobacter violaceus GN=rpmB PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 R C TGKK+N A VSFS+ + + Q NLQ+K++W + +V+L+LSTKA+KT+E L A+AK+A +DL K Sbjct: 3 RKCMLTGKKANNAYSVSFSHRRNKRLQMANLQWKRIWDDQQGCFVRLKLSTKAIKTLEHRSLHALAKEAGLDLSK 77
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_PROMT (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain NATL2A) GN=rpmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TG ++N VS S+ +T K Q NLQ +++WWE +++ +R++T+ALKTI+K GL AK +DL K Sbjct: 3 RVCQLTGTRANNGMSVSHSHIRTKKLQQANLQQRRLWWEEENKWINIRVTTRALKTIQKKGLGKYAKSLGVDLNK 77
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_PROM1 (50S ribosomal protein L28 OS=Prochlorococcus marinus (strain NATL1A) GN=rpmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TG ++N VS S+ +T K Q NLQ +++WWE +++ +R++T+ALKTI+K GL AK +DL K Sbjct: 3 RVCQLTGTRANNGMSVSHSHIRTKKLQQANLQQRRLWWEEENKWINIRVTTRALKTIQKKGLGKYAKSLGVDLNK 77
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_THIDA (50S ribosomal protein L28 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpmB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12 Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LRLS AL+TI+KNG+++V R Sbjct: 3 RVCVVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRLSNAALRTIDKNGIESVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_VEREI (50S ribosomal protein L28 OS=Verminephrobacter eiseniae (strain EF01-2) GN=rpmB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.450e-12 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQY++ W E R+V+LR+S+ AL+ I+KNG+DAV R Sbjct: 3 RVCDVTGKKPMVGNNVSHANNKTRRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDKNGIDAVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_NITMU (50S ribosomal protein L28 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK + VS +N+KT +R NLQ ++ W E+ +R++ LRLS +AL+TI+KNG+DAV + R Sbjct: 3 RVCEVTGKKPMTGHHVSHANNKTKRRFLPNLQRRRFWVESERRWISLRLSNEALRTIDKNGIDAVLAEMR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_DIAST (50S ribosomal protein L28 OS=Diaphorobacter sp. (strain TPSY) GN=rpmB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGKK N VS +N+KT +R NLQY++ W E+ R+V+LR+S+ AL+ I+KNG+D+V R Sbjct: 3 RVCEVTGKKPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDKNGIDSVLADMR 72 The following BLAST results are available for this feature:
BLAST of EY753463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753463 ID=EY753463; Name=EY753463; organism=Citrus sinensis; type=EST; length=823bpback to top |