EY753463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_XANOM (50S ribosomal protein L28 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC +GK+ N VS +N++T +R NL ++ W + R+VKLR+S AL+TI+KNG+DAV K+ R Sbjct: 3 RVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNGIDAVLKELR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_XANCP (50S ribosomal protein L28 OS=Xanthomonas campestris pv. campestris GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC +GK+ N VS +N++T +R NL ++ W + R+VKLR+S AL+TI+KNG+DAV K+ R Sbjct: 3 RVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNGIDAVLKELR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_XANCB (50S ribosomal protein L28 OS=Xanthomonas campestris pv. campestris (strain B100) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC +GK+ N VS +N++T +R NL ++ W + R+VKLR+S AL+TI+KNG+DAV K+ R Sbjct: 3 RVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNGIDAVLKELR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_XANC8 (50S ribosomal protein L28 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC +GK+ N VS +N++T +R NL ++ W + R+VKLR+S AL+TI+KNG+DAV K+ R Sbjct: 3 RVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNGIDAVLKELR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_XANC5 (50S ribosomal protein L28 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC +GK+ N VS +N++T +R NL ++ W + R+VKLR+S AL+TI+KNG+DAV K+ R Sbjct: 3 RVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNGIDAVLKELR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_XANAC (50S ribosomal protein L28 OS=Xanthomonas axonopodis pv. citri GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC +GK+ N VS +N++T +R NL ++ W + R+VKLR+S AL+TI+KNG+DAV K+ R Sbjct: 3 RVCQVSGKRVQTGNNVSHANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDKNGIDAVLKELR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_BORPD (50S ribosomal protein L28 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=rpmB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493 RVC TGK N VS +N+KT +R NLQ ++ W E+ R+V+LR+S KA++ I+KNG+DAV R Sbjct: 3 RVCQVTGKGPMTGNNVSHANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRIIDKNGIDAVLADLR 72
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_PSEPK (50S ribosomal protein L28 OS=Pseudomonas putida (strain KT2440) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TGK N +S +N+KT +R NLQ+ + W E+ KR+V+LR+S K ++ I+K G+DAV +D+RK Sbjct: 3 RVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIDAVL----VDIRK 73
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_PSEPG (50S ribosomal protein L28 OS=Pseudomonas putida (strain GB-1) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TGK N +S +N+KT +R NLQ+ + W E+ KR+V+LR+S K ++ I+K G+DAV +D+RK Sbjct: 3 RVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIDAVL----VDIRK 73
BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_PSEP1 (50S ribosomal protein L28 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpmB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 2 Query: 284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 508 RVC TGK N +S +N+KT +R NLQ+ + W E+ KR+V+LR+S K ++ I+K G+DAV +D+RK Sbjct: 3 RVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRGIDAVL----VDIRK 73 The following BLAST results are available for this feature:
BLAST of EY753463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753463 ID=EY753463; Name=EY753463; organism=Citrus sinensis; type=EST; length=823bpback to top |