EY753463

Overview
NameEY753463
Unique NameEY753463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753463 vs. ExPASy Swiss-Prot
Match: RL28_NITEU (50S ribosomal protein L28 OS=Nitrosomonas europaea GN=rpmB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 2 
Query:  284 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAR 493
            RVC  TGK+    + VS +N+KT +R   NLQ ++ W E+  R+++LRL+  AL+T++KNG+D+V    R
Sbjct:    3 RVCQVTGKRPMSGHNVSHANNKTKRRFLPNLQSRRFWLESENRWIRLRLTNAALRTVDKNGIDSVVADMR 72
The following BLAST results are available for this feature:
BLAST of EY753463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
RL28_NITEU8.497e-1142.8650S ribosomal protein L28 OS=Nitrosomonas europaea... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-003-A12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753463 ID=EY753463; Name=EY753463; organism=Citrus sinensis; type=EST; length=823bp
ATTCCAAAACTGACCCACGCGTCCGCAAATACACTTGGAATCGAAAAGAT
GGCAACAATGCCCGACACCGGGAGGAGTTTTATTGGGAAACACTTCCAAT
CTACCCTGTCGCCGCCCACGTCTGTCTCCGAAGTCCATGGTTAAGGTAGT
CTCCTCCTCGGAAGAACTGGGTTTCGTTACTTCACAACTCAGTGGCATCA
AAATTTCGTACCGCCTACCTGACGTGGCCACACCCATTTCCTCTCGTCCT
TTCGCCCCGGGTCTTCAACCTATTGTTGCGCGTAGAGTGTGCCCCTTCAC
TGGAAAGAAATCAAACAAGGCAAACAAAGTTTCCTTCTCTAACCACAAGA
CAACTAAGCGGCAGTTTGTTAACCTACAGTATAAGAAGGTTTGGTGGGAG
GCCGGCAAGCGTTATGTGAAGCTGCGTTTGTCAACAAAGGCATTAAAGAC
GATAGAGAAAAATGGATTGGATGCTGTTGCTAAGAAGGCTAGAATAGATC
TTCGCAAGGAATGATATAGATGGTCTAACTATTTTTACCTATAGCTGTTG
GTAAAGCTTGTATGCTCACTGTTTCTCTCGAAATTTAATTTCATGTTGCA
CTGTATCTTCTTTTTGCTTGTTCTGTTGAATTCTTCCCAATTAAATGAGA
ATACTGATCATTAAAGCCTCAAGGTTTTTGTTAGTTCATTTTCGCATGTC
GTCATGAGGCTTTGCGTCGATGGCTCTATGAGCATTCAGCGCGTNGTGTA
TGATCTTCTATCAGAAGAAAGAGAATTGTAAAACACAGAACAGCATTTTT
GCTGAAAAAAAAAAAAAAAAAAA
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