EY753356

Overview
NameEY753356
Unique NameEY753356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_STRS2 (Serine hydroxymethyltransferase OS=Streptococcus suis (strain 98HAH33) GN=glyA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.041e-33
Identity = 75/168 (44.64%), Postives = 101/168 (60.12%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            D E+ + I+ E+ RQ   +ELI SEN  S +VM A GS++TNKY+EGYPG RYYGG E +D+ ESL  +RA E F         NVQ  SGS +N   Y AL++P D +M +DL  GGHL+HG       +S     +  + Y ++E TG LDYD + K A  +Q K+
Sbjct:   12 DKEVWEAIQAEEKRQQNNIELIASENVVSKAVMAAQGSILTNKYAEGYPGRRYYGGTECVDVVESLAIERAKEIFGAK----FANVQPHSGSQANCAAYMALIEPGDTVMGMDLAAGGHLTHG-----ASVSFSGQTYNFVAYNVDEETGLLDYDAILKQAKEVQPKL 170          

HSP 2 Score: 28.4906 bits (62), Expect = 1.041e-33
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCN 824
            +PKLI AGA AYAR  D+ +  ++ +
Sbjct:  167 QPKLIVAGASAYARTIDFAKFREIAD 192          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_DEHE1 (Serine hydroxymethyltransferase OS=Dehalococcoides ethenogenes (strain 195) GN=glyA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.041e-33
Identity = 73/165 (44.24%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            L+  DP + + I  E  R  + ++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G EY D  E L   RA   F  +      NVQ  SG+ +N   Y A++KP D IM L L HGGHL+HG      K +     +  + Y LN  T  +DYD LEK A
Sbjct:    4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAIEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKANFTGKLYHVIEYGLNAETERIDYDNLEKLA 159          

HSP 2 Score: 35.039 bits (79), Expect = 1.041e-33
Identity = 15/30 (50.00%), Postives = 20/30 (66.67%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKA 836
            RP+LI  GA AY R+ D+ER   +C+K  A
Sbjct:  163 RPRLIVTGASAYPRILDFERFRAICDKVDA 192          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_MYCA5 (Serine hydroxymethyltransferase OS=Mycoplasma arthritidis (strain 158L3-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.282e-33
Identity = 79/179 (44.13%), Postives = 109/179 (60.89%), Query Frame = 2
Query:  230 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766
            +N  + + D +IAD+I  E  RQ + +ELI SEN+ S  VM+A GS +TNKY EGYPG RYYGG E++D  E + Q+RA + F         NVQ  SGS +N  +Y ALL P D ++ L L  GGHL+HGY     +IS   IF+++  Y +N+  G LDYD + K A  ++ K+  C
Sbjct:    1 MNKKVTLHDQDIADLINKESHRQEEHIELIASENYVSEDVMKAAGSSLTNKYGEGYPGKRYYGGCEFVDEIEKIAQERACKLFNAK----YANVQPYSGSVANAAIYMALLNPGDSVLGLSLDSGGHLTHGY-----RISFSGIFYKSYTYTVNQD-GVLDYDEILKIAQEVKPKMIIC 169          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA2_RHILO (Serine hydroxymethyltransferase 2 OS=Rhizobium loti GN=glyA2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.355e-33
Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 2
Query:  251 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWCWG 772
            VD  + +++  ++ ++   L+LI SENF S +V++A GS+  NKY+EGYPGARYY GNE +D  E+L  +R    F  +      NVQ  SGSP+N  VY ALL P D++M L LP GGHL+HG+      ++     ++ +PY L++ T  +DYD L ++A   + K+ W  G
Sbjct:   15 VDCRVHELLLRQRRQERTMLKLIASENFASSAVLEATGSIFANKYAEGYPGARYYAGNEIVDELETLAIERLKALFGSE----HANVQPYSGSPANQAVYRALLSPRDKVMGLPLPEGGHLTHGW-----SVNFSGTDYQRVPYGLHDKTQQIDYDRLRETARRERPKLIWVGG 179          

HSP 2 Score: 27.335 bits (59), Expect = 1.355e-33
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKV 818
            RPKLI  G  +Y R++DY  + ++
Sbjct:  171 RPKLIWVGGTSYPRVFDYAAMAEI 194          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_RHOP2 (Serine hydroxymethyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=glyA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.356e-33
Identity = 79/175 (45.14%), Postives = 105/175 (60.00%), Query Frame = 2
Query:  233 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            +A LE  DPEIA  I+ E  RQ   +ELI SEN  S +V++A GSVMTNKY+EGYPGARYYGG E++D+AE+L  +RA + F         NVQ  SGS  N  V+ ALL+P D  M LDL  GGHL+HG       ++    +F+ + Y +    G +D D + K A   + K+
Sbjct:   16 SASLEQADPEIAAAIKGELGRQRHEVELIASENIVSRAVLEAQGSVMTNKYAEGYPGARYYGGCEFVDVAENLAIERAKKLFGAG----FANVQPNSGSQMNQAVFLALLQPGDTFMGLDLAAGGHLTHG-----ATVNMSGKWFKPVHYTVRREDGIIDMDAVAKLAEETRPKL 181          

HSP 2 Score: 30.0314 bits (66), Expect = 1.356e-33
Identity = 12/26 (46.15%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCN 824
            RPKLI AG  AY+R +D++R  ++ +
Sbjct:  178 RPKLIIAGGSAYSRAWDFKRFREIAD 203          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ACAM1 (Serine hydroxymethyltransferase OS=Acaryochloris marina (strain MBIC 11017) GN=glyA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.356e-33
Identity = 79/175 (45.14%), Postives = 104/175 (59.43%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766
            L   DP IA I++ E  RQ   LELI SENFTS +V+ A GSV+TNKY+EG PG RYYGG EYID AE L   RA E F        VNVQ  SG+ +NF V+  LL+P D  M +DL HGGHL+HG       ++    +F  + Y ++ ++  L+YD + + A   + K+  C
Sbjct:    8 LTETDPAIAGILQQELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGLPGKRYYGGCEYIDAAEQLAIDRAKELFGAA----HVNVQPHSGAQANFAVFLTLLQPGDTFMGMDLSHGGHLTHG-----SPVNVSGKWFNVVQYGVDPNSEQLNYDTIRELALKHRPKMIVC 173          

HSP 2 Score: 26.5646 bits (57), Expect = 1.356e-33
Identity = 10/27 (37.04%), Postives = 17/27 (62.96%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNK 827
            RPK+I  G  AY R+ D+E+   + ++
Sbjct:  167 RPKMIVCGYSAYPRIIDFEKFRAIADE 193          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_THERP (Serine hydroxymethyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glyA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.356e-33
Identity = 75/168 (44.64%), Postives = 104/168 (61.90%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            D E+A+ I  E+ RQ + +ELI SENFTS +V+ AVGSV+TNKY+EGYPG RYYGG E +D  E L  +RA + F        VNVQ  SG+ +N   Y A+L+P DRI+ + L HGGHL+HG      K++    +FE   Y ++  T  +DYD +   A  ++ K+
Sbjct:    9 DFEVAEAIACEERRQSRTIELIASENFTSPAVLAAVGSVLTNKYAEGYPGRRYYGGCECVDRVEELAIQRAKQLFGAP----HVNVQPHSGAQANMAAYFAVLQPGDRILGMSLQHGGHLTHG-----AKVNLSGRWFEVAFYGVDPETERIDYDAVWHIAREIRPKL 167          

HSP 2 Score: 30.8018 bits (68), Expect = 1.356e-33
Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848
            RPKLI +GA AY R+ D+ R+ ++ +   AI  A
Sbjct:  164 RPKLIISGASAYPRVIDFARLREIADDVGAILMA 197          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_GRAFK (Serine hydroxymethyltransferase OS=Gramella forsetii (strain KT0803) GN=glyA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.356e-33
Identity = 70/161 (43.48%), Postives = 97/161 (60.25%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D ++ D+I  EK RQ  GLELI SENF S +V++A GSV+TNKY+EGYPG RYYGG E +D  E L   R  E F  +      NVQ  SGS +N  V+  ++KP D+ +  DL HGGHL+HG       ++     +  + Y +++ TG +DYD + + A
Sbjct:    4 DTQVFDLIAKEKERQLNGLELIASENFVSEAVLEAAGSVLTNKYAEGYPGKRYYGGCEVVDQVEQLAIDRLKELFNAE----YANVQPHSGSQANTAVFHTVMKPGDKFLGFDLSHGGHLTHG-----SPVNFSGKLYNPVFYGVDKETGLIDYDAVAEIA 155          

HSP 2 Score: 30.8018 bits (68), Expect = 1.356e-33
Identity = 14/31 (45.16%), Postives = 21/31 (67.74%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839
            +PK+I AGA AY+R  DY+R  ++ +   AI
Sbjct:  159 KPKMIIAGASAYSREIDYKRFREIADSVGAI 189          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ALHEH (Serine hydroxymethyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.356e-33
Identity = 78/168 (46.43%), Postives = 104/168 (61.90%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            DPE+++ +E E+ RQ   +ELI SEN+ S  V++A GSV+TNKY+EGYPG RYYGG E++D AE L  +RA + F  D      NVQ  SGS +N  VY ALL+P D I+ + L HGGHL+HG      K++     F  + Y +   TG LDY  LE+ A   Q K+
Sbjct:   12 DPELSEAMEAERRRQEDHIELIASENYASPRVLEAQGSVLTNKYAEGYPGKRYYGGCEHVDEAERLAIERAKQLFGAD----YANVQPHSGSQANAAVYLALLQPGDTILGMSLDHGGHLTHG-----AKVNFSGRLFNAVQYGVCPDTGELDYAQLERLAKEHQPKM 170          

HSP 2 Score: 25.0238 bits (53), Expect = 1.356e-33
Identity = 9/26 (34.62%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCN 824
            +PK+I  G  AY+R+ D++R+  + +
Sbjct:  167 QPKMIIGGFSAYSRVVDWQRLRDIAD 192          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA4_COLP3 (Serine hydroxymethyltransferase 4 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA4 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.356e-33
Identity = 78/168 (46.43%), Postives = 100/168 (59.52%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            D  I   +E E  RQ   +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG E++D+ E L   RA E F  D      NVQ  SGS +N  V+ ALLKP + ++ + L HGGHL+HG      K+S     +  + Y LNE TG +DYD + + A   Q K+
Sbjct:   12 DDSIWQAMEQEDKRQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKELFGAD----YANVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSFSGKIYNAVQYGLNEVTGEIDYDEVARLAKEHQPKM 170          

HSP 2 Score: 25.7942 bits (55), Expect = 1.356e-33
Identity = 10/26 (38.46%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCN 824
            +PK+I AG  AY+R+ D++R   + +
Sbjct:  167 QPKMIIAGFSAYSRVVDWQRFRDIAD 192          
The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_STRS21.041e-3344.64Serine hydroxymethyltransferase OS=Streptococcus s... [more]
GLYA_DEHE11.041e-3344.24Serine hydroxymethyltransferase OS=Dehalococcoides... [more]
GLYA_MYCA51.282e-3344.13Serine hydroxymethyltransferase OS=Mycoplasma arth... [more]
GLYA2_RHILO1.355e-3340.80Serine hydroxymethyltransferase 2 OS=Rhizobium lot... [more]
GLYA_RHOP21.356e-3345.14Serine hydroxymethyltransferase OS=Rhodopseudomona... [more]
GLYA_ACAM11.356e-3345.14Serine hydroxymethyltransferase OS=Acaryochloris m... [more]
GLYA_THERP1.356e-3344.64Serine hydroxymethyltransferase OS=Thermomicrobium... [more]
GLYA_GRAFK1.356e-3343.48Serine hydroxymethyltransferase OS=Gramella forset... [more]
GLYA_ALHEH1.356e-3346.43Serine hydroxymethyltransferase OS=Alkalilimnicola... [more]
GLYA4_COLP31.356e-3346.43Serine hydroxymethyltransferase 4 OS=Colwellia psy... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCATAATCATACAACAAACAAAGAAGAAACAGACAACATC
TTGCAGCGGGAGAGTGAGAAGCAAAAATGGCCATGGCTCTGGCTCTTCGC
AGGCTCTCATCTTCCCTCGACAAACCCACTCGTCCTCTCTTCAATGGCTC
CTCCCTCTACTACATGTCATCTTTGCCAAATGAAGCTGTTTACGAGAAAG
AGAAAAATGGTGTCACTTGGCCAAAACAACTGAATGCTCCACTTGAGGTC
GTTGATCCTGAGATTGCTGACATTATCGAGCATGAAAAAGCACGACAATG
GAAGGGACTTGAACTCATTCCTTCAGAGAACTTTACTTCAGTATCCGTGA
TGCAAGCTGTGGGGTCTGTCATGACCAACAAGTACAGTGAAGGATATCCA
GGTGCAAGATATTATGGAGGAAACGAGTATATTGACATGGCGGAATCCTT
ATGTCAGAAGCGAGCTCTGGAAGCATTTCGGTTGGATCCTGAAAAATGGG
GAGTGAATGTGCAGTCTCTGTCTGGATCTCCATCTAATTTTCAAGTCTAC
ACTGCATTGTTAAAACCTCATGATAGGATCATGGCACTTGATCTTCCTCA
TGGTGGGCATCTCTCACACGGCTATCAGACAGATACCAAAAAGATATCTG
CAGTGTCCATATTTTTTGAGACAATGCCATACAGATTGAATGAGAGCACT
GGCTATCTAGACTATGACCCGTTGGAGAAAAGTGCCACCCTTCTTCAGGC
CAAAATTGATTGGTGCTGGGGCCAGGGCTTATGCACGATTGTACGATTAT
GAGCGTATTCCAAAGGTTTGCAACAAACAAAAAGCCATAAGGTCGGCGTA
ATG
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