EY753356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.009e-54 Identity = 106/202 (52.48%), Postives = 140/202 (69.31%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWCWGQGLCTIVRL*AYSKGLQQTKSHKV 844 ++ VDPE+ I+ E++RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGN++ID AESLCQ RAL+ + LDPEKWGVNVQ+LSG+P+N Y+A+++ DR+M LDLPHGGHLSHGYQ + KIS +S +F TMPY +N TG +DYD L ++ L + K+ + AYS+ L + K+ Sbjct: 27 VQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPKV---------IVAGTSAYSRKLDYARFRKI 219
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 7.761e-51 Identity = 97/167 (58.08%), Postives = 122/167 (73.05%), Query Frame = 2 Query: 239 PLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSAT 739 PLE+ DPE+ +I E RQ K + LI SEN+ S M+A GSV+TNKYSEG G RYYGG ++D E LCQKRALE F LDP+ WGVNVQ SGSP+NF +YTA++ P RIM LDLP GGHL+HGY+T T+KISA S++F++ PY + S G +DY+ LEK+ T Sbjct: 13 PLEMADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSEGRVGERYYGGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPGGRIMGLDLPSGGHLTHGYKTKTRKISASSVYFDSRPYTVG-SNGLIDYEGLEKTFT 178 HSP 2 Score: 24.6386 bits (52), Expect = 7.761e-51 Identity = 10/31 (32.26%), Postives = 17/31 (54.84%), Query Frame = 3 Query: 744 FRPKLIGAGARAYARLYDYERIPKVCNKQKA 836 F P ++ G AY+R DY+R+ + + A Sbjct: 180 FLPHILICGYSAYSRDIDYKRLQSIAGRNGA 210
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_THEPX (Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=glyA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.091e-39 Identity = 78/168 (46.43%), Postives = 107/168 (63.69%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL+HG K++ + + Y + E TGY+DYD +E+ A + K+ Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKL 168 HSP 2 Score: 31.9574 bits (71), Expect = 7.091e-39 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 +PKLI AGA AY R+ D++R ++ +K Sbjct: 165 KPKLIVAGASAYPRIIDFKRFREIADK 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_THEP3 (Serine hydroxymethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.091e-39 Identity = 78/168 (46.43%), Postives = 107/168 (63.69%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 DPEIAD IE E RQ +ELI SENF S +VM+A+GS +TNKY+EGYP RYYGG EY+D+AE L ++R + F + NVQ SG+ +N Y AL+KP D ++ +DL HGGHL+HG K++ + + Y + E TGY+DYD +E+ A + K+ Sbjct: 10 DPEIADAIEKELIRQRNKIELIASENFVSRAVMEAMGSPLTNKYAEGYPNKRYYGGCEYVDIAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALIKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKL 168 HSP 2 Score: 31.9574 bits (71), Expect = 7.091e-39 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 +PKLI AGA AY R+ D++R ++ +K Sbjct: 165 KPKLIVAGASAYPRIIDFKRFREIADK 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 9.230e-39 Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 2 Query: 233 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 N L+ +DPE+ + I +E RQ + LELI SENFTS +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V A+LKP D IM LDL HGGHL+HG K++ FF+ Y +++ TG +D + +E+ A ++ K+ Sbjct: 3 NDILKRLDPEVFEAIANETKRQTETLELIASENFTSKAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDAIMGLDLSHGGHLTHG-----SKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMARRVKPKL 168 HSP 2 Score: 27.7202 bits (60), Expect = 9.230e-39 Identity = 13/34 (38.24%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848 +PKLI GA AY++ +D++ +V +K A+ A Sbjct: 165 KPKLIITGASAYSQGFDFKAFREVADKVGALLMA 198
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBL (Serine hydroxymethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glyA PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.203e-38 Identity = 80/170 (47.06%), Postives = 111/170 (65.29%), Query Frame = 2 Query: 227 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 +++ L DP+IA+ I +E+ RQ +GLELI SENF S +V+QA GSV TNKY+EGYPG RYYGG EY D+ E+L + RA E F + NVQ SGS +N + Y A+L+P D I+ L+L HGGHL+HG+ ++ ++ +PY + + T +DYD LEK A Sbjct: 4 RMSQSLNEEDPQIAEAIANEERRQHEGLELIASENFVSEAVLQAAGSVFTNKYAEGYPGKRYYGGCEYADVVENLARDRAKELFGAE----HANVQPHSGSSANMEAYGAILQPGDTILGLNLAHGGHLTHGH-----PLNFSGKTYKIVPYGVTKETETIDYDELEKLA 164 HSP 2 Score: 30.0314 bits (66), Expect = 1.203e-38 Identity = 11/30 (36.67%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 750 PKLIGAGARAYARLYDYERIPKVCNKQKAI 839 PK+I G AY R++D++R+ ++ +K A+ Sbjct: 169 PKVIVGGGSAYPRIFDFKRMREIADKAGAL 198
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.567e-38 Identity = 83/172 (48.26%), Postives = 115/172 (66.86%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 L+ +DPE+ + I +E RQ + LELI SENFTS +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V A+LKP D IM LDL HGGHL+HG K++ FF+ Y +++ TG +D + +E+ A ++ K+ Sbjct: 6 LKRLDPEVFEAIANETRRQTETLELIASENFTSTAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDSIMGLDLSHGGHLTHG-----SKVNFSGQFFDAHSYGVDKETGIIDMNAVEEMALKVKPKL 168 HSP 2 Score: 26.5646 bits (57), Expect = 1.567e-38 Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848 +PKLI GA AY++ +D++ ++ +K A A Sbjct: 165 KPKLIITGASAYSQGFDFKAFREIADKVGAFLMA 198
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.043e-38 Identity = 78/168 (46.43%), Postives = 108/168 (64.29%), Query Frame = 2 Query: 233 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 N L DPE+A IE E RQ + +ELI SENF S +V++A GS++TNKY+EGYPG RYYGG E++D+AESL RA + F D NVQ SG+ +NF VY ALL+P D+I+ ++L HGGHL+HG ++ +F + Y + E TG ++Y+ L + A Sbjct: 3 NGKLAQTDPELAKAIELEHQRQQRNIELIASENFVSPAVLEAQGSILTNKYAEGYPGKRYYGGCEFVDIAESLAISRAKKLFGAD----HANVQPHSGAQANFAVYFALLQPGDKILGMNLAHGGHLTHG-----SPVNVSGKYFNVVAYGVEEDTGCINYEKLREIA 161 HSP 2 Score: 30.4166 bits (67), Expect = 2.043e-38 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 +PK+I AGA AYAR D+++I ++ + Sbjct: 165 KPKMIVAGASAYARAIDFKKIGEIAKE 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 3.467e-38 Identity = 78/168 (46.43%), Postives = 107/168 (63.69%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 DPEIA++I E RQ +ELI SENF S +VM+A+G+ +TNKY+EGYPG RYYGG EY+DMAE L ++R + F + NVQ SG+ +N Y ALLKP D ++ +DL HGGHL+HG K++ + + Y + E TGY+DYD +E A + K+ Sbjct: 10 DPEIAEVILKELNRQRNKIELIASENFVSRAVMEAMGTPLTNKYAEGYPGRRYYGGCEYVDMAEELARERLKKLFGAE----HANVQPHSGAQANMAAYFALLKPGDTVLGMDLAHGGHLTHG-----SKVNFSGQIYNFVSYGVREDTGYIDYDQVEDLAKKHKPKL 168 HSP 2 Score: 30.8018 bits (68), Expect = 3.467e-38 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 +PKLI AGA AY R+ D+++ ++ +K Sbjct: 165 KPKLIVAGASAYPRIIDFKKFREIADK 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SOLUE (Serine hydroxymethyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.882e-38 Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = 2 Query: 212 VTWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 +T ++++ L VDPEI I+HE ARQ LELI SENFTS +V++A GSV TNKY+EGYPG RYYGG EY D+ E+L ++RA + F + VNVQ SGS +N Y A++ P D +M L+L HGGHL+HG+ ++ ++ +PY + + +DYD +EK A Q K+ Sbjct: 1 MTESQRMSRTLAEVDPEIYQAIQHETARQDGQLELIASENFTSEAVLEATGSVFTNKYAEGYPGKRYYGGCEYTDVVENLARERASKLFGAE----YVNVQPHSGSQANQAAYGAVVSPGDTVMGLNLAHGGHLTHGH-----ALNFSGKTYKIVPYNVRKEDELIDYDEVEKLAREHQPKM 173 HSP 2 Score: 30.0314 bits (66), Expect = 5.882e-38 Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839 +PK+I AGA AY R+ D+ R K+ + A+ Sbjct: 170 QPKMIIAGASAYPRIIDFARFRKIADAVGAV 200 The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bpback to top |