EY753356

Overview
NameEY753356
Unique NameEY753356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_DESAA (Serine hydroxymethyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glyA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 9.986e-38
Identity = 83/162 (51.23%), Postives = 101/162 (62.35%), Query Frame = 2
Query:  251 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            VDPE A  IE E  RQ   LELI SEN  S +VM A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA E F+ D      NVQ  SGS +N  VY ALL+P D ++ +DL HGGHL+HG       +S     F  + Y + E TG +DYD L   A
Sbjct:    9 VDPEAAKAIEQELDRQQFTLELIASENIASPAVMAAQGSVMTNKYAEGYPGHRYYGGCEFVDVAENLARDRAKELFQAD----YANVQPHSGSQANMGVYFALLEPGDTVLGMDLSHGGHLTHG-----SPVSFSGRIFNFIHYGVKEKTGTIDYDQLRSLA 161          

HSP 2 Score: 30.4166 bits (67), Expect = 9.986e-38
Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKA 836
            +PKLI AGA AY R+ D+  + K+  +  A
Sbjct:  165 KPKLIVAGASAYPRIIDFPELEKIARETGA 194          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.207e-37
Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            L   DP IAD+IE E  RQ +GLELI SEN+TS++VM+A GSV+TNKY+EG PG RYYGG E++D  E L  +RA + F         NVQ  SG+ +N  V+TALL+P D I+ + L HGGHL+HG       ++    ++    Y ++  TG +DYD L   A  ++ K+
Sbjct:    5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKL 167          

HSP 2 Score: 31.5722 bits (70), Expect = 2.207e-37
Identity = 14/34 (41.18%), Postives = 23/34 (67.65%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848
            RPKLI +GA AY R+ D+ R+ ++ ++  A+  A
Sbjct:  164 RPKLITSGASAYPRIIDFARMRQIADEVGALLMA 197          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_BACTN (Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron GN=glyA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.875e-37
Identity = 80/161 (49.69%), Postives = 100/161 (62.11%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D  I DIIE E  RQ KG+ELI SENF S  VMQA+GS +TNKY+EGYPG RYYGG E +D +E +   R  E F  +   W  NVQ  SG+ +N  V+ A+L P D+ M L+L HGGHLSHG   +T       I +    Y LN+ TG +DYD +E+ A
Sbjct:    4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNQETGRVDYDQMEEVA 155          

HSP 2 Score: 31.187 bits (69), Expect = 2.875e-37
Identity = 13/31 (41.94%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839
            +PK+I  G  AY+R +DY+R+ ++ +K  AI
Sbjct:  159 KPKMIIGGGSAYSREWDYKRMREIADKVGAI 189          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.876e-37
Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            L   DP IAD+IE E  RQ +GLELI SEN+TS++VM+A GSV+TNKY+EG PG RYYGG E++D  E L   RA + F         NVQ  SG+ +N  V+TALL+P D I+ + L HGGHL+HG       ++    ++    Y ++  TG +DYD L   A  ++ K+
Sbjct:    5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIDRACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDPQTGQIDYDDLAAKARAIRPKL 167          

HSP 2 Score: 32.3426 bits (72), Expect = 2.876e-37
Identity = 15/34 (44.12%), Postives = 23/34 (67.65%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848
            RPKLI +GA AY RL D+ R+ ++ ++  A+  A
Sbjct:  164 RPKLITSGASAYPRLIDFARMRQIADEVGALLMA 197          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAA (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 6.357e-37
Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            L   DP IAD+IE E  RQ +GLELI SEN+TS++VM+A GSV+TNKY+EG PG RYYGG E++D  E L  +RA + F         NVQ  SG+ +N  V+TALL+P D I+ + L HGGHL+HG       ++    ++    Y ++  TG +DYD L   A  ++ K+
Sbjct:    5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKL 167          

HSP 2 Score: 30.0314 bits (66), Expect = 6.357e-37
Identity = 13/34 (38.24%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848
            RPKLI +G  AY R+ D+ R+ ++ ++  A+  A
Sbjct:  164 RPKLITSGVSAYPRIIDFARMRQIADEVGALLMA 197          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.280e-37
Identity = 79/161 (49.07%), Postives = 100/161 (62.11%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D  I DIIE E  RQ KG+ELI SENF S  VMQA+GS +TNKY+EGYPG RYYGG E +D +E +   R  + F  +   W  NVQ  SG+ +N  V+ A+L P D+ M L+L HGGHLSHG   +T       I +    Y LN+ TG +DYD +E+ A
Sbjct:    4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKQIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLNKETGRVDYDQMEEIA 155          

HSP 2 Score: 31.187 bits (69), Expect = 8.280e-37
Identity = 13/31 (41.94%), Postives = 22/31 (70.97%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839
            +PK+I  G  AY+R +DY+R+ ++ +K  AI
Sbjct:  159 KPKMIIGGGSAYSREWDYKRMREIADKVGAI 189          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 8.283e-37
Identity = 76/165 (46.06%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            LE  DP +A++I HE  RQ   LELI SENF S +V++A GSV+TNKY+EGYPG RYYGG   +D+ E+L   RA E F  D     VNVQ  SGS +N  VY ++LKP D ++ ++L HGGHL+HG       ++     F  +PY +++ T  +DY+  E+ A
Sbjct:    4 LETFDPAVAEVIRHETERQEYNLELIASENFVSPAVLEAQGSVLTNKYAEGYPGKRYYGGCHCVDVVENLAIDRAKELFGAD----HVNVQPHSGSQANMAVYFSVLKPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLFNIVPYGVSKETQTIDYEETERLA 159          

HSP 2 Score: 30.4166 bits (67), Expect = 8.283e-37
Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839
            +PK+I  GA AY R+ D+E   ++ +K  A+
Sbjct:  163 KPKMIVVGASAYPRIIDFEAFRRIADKVGAV 193          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPD (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glyA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.078e-36
Identity = 81/175 (46.29%), Postives = 111/175 (63.43%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766
            L++ D E+ + + +E  RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F        VNVQ  SGS +N  V  ++LKP DRIM LDL HGGHL+HG       ++     +E   Y +   TG +D + +E+ A  ++ K+  C
Sbjct:    6 LQMQDKEVFEAVVNETVRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFNCS----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SPVNFSGQLYEAHSYGVRRETGCIDMNMVEELANKVRPKLIIC 171          

HSP 2 Score: 26.9498 bits (58), Expect = 1.078e-36
Identity = 12/34 (35.29%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848
            RPKLI  GA AY++ +D++   ++ ++  A+  A
Sbjct:  165 RPKLIICGASAYSQGFDFKAFREIADRIGALLMA 198          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.078e-36
Identity = 85/175 (48.57%), Postives = 110/175 (62.86%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766
            L+  D  I D I  E  RQ + LELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F  D     VNVQ  SGS +N  V  A+LKP DRIM LDL HGGHL+HG      K++     FE   Y ++  TG +D + +E+ A  ++ K+  C
Sbjct:    6 LQRQDKGIFDAITAEVRRQTETLELIASENFASRAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMGVLFAVLKPGDRIMGLDLSHGGHLTHG-----SKVNFSGQLFEAHSYGVDRETGCIDMNKVEEMALEVRPKLIIC 171          

HSP 2 Score: 27.335 bits (59), Expect = 1.078e-36
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848
            RPKLI  GA AY++ +D++    V +K  A   A
Sbjct:  165 RPKLIICGASAYSQGFDFKAFRDVADKVGAFLMA 198          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_OENOB (Serine hydroxymethyltransferase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=glyA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.079e-36
Identity = 77/162 (47.53%), Postives = 103/162 (63.58%), Query Frame = 2
Query:  251 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            +DP++A  +  E+ RQ   +EL+ SENF S +V QA GSV+TNKYSEGYPG RYYGGNEYID+AE+L  +RA E F +       NVQ  SGS +NF+ Y A L P D+I+ ++L  GGHL+HG       +S     +E   Y+++  T  LDYD + K A
Sbjct:    6 LDPQLAKAVSGEEERQRHNIELVASENFVSKAVRQAQGSVLTNKYSEGYPGKRYYGGNEYIDIAENLAIERAKELFGVS----YANVQPHSGSSANFEAYMAFLHPGDKILGMNLDSGGHLTHG-----ASVSFSGKMYEAQSYKVDSETELLDYDAILKQA 158          

HSP 2 Score: 28.1054 bits (61), Expect = 1.079e-36
Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  744 FRPKLIGAGARAYARLYDYERIPKVCNKQKA 836
            F+P LI AGA AY+R  D++    + ++  A
Sbjct:  161 FKPNLIIAGASAYSRTIDFQAFRDIADEVNA 191          
The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_DESAA9.986e-3851.23Serine hydroxymethyltransferase OS=Desulfatibacill... [more]
GLYA_CHLSY2.207e-3745.35Serine hydroxymethyltransferase OS=Chloroflexus au... [more]
GLYA_BACTN2.875e-3749.69Serine hydroxymethyltransferase OS=Bacteroides the... [more]
GLYA_CHLAD2.876e-3745.35Serine hydroxymethyltransferase OS=Chloroflexus ag... [more]
GLYA_CHLAA6.357e-3745.35Serine hydroxymethyltransferase OS=Chloroflexus au... [more]
GLYA_BACV88.280e-3749.07Serine hydroxymethyltransferase OS=Bacteroides vul... [more]
GLYA_GEOSM8.283e-3746.06Serine hydroxymethyltransferase OS=Geobacter sp. (... [more]
GLYA_CHLPD1.078e-3646.29Serine hydroxymethyltransferase OS=Chlorobium phae... [more]
GLYA_CHLPB1.078e-3648.57Serine hydroxymethyltransferase OS=Chlorobium phae... [more]
GLYA_OENOB1.079e-3647.53Serine hydroxymethyltransferase OS=Oenococcus oeni... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCATAATCATACAACAAACAAAGAAGAAACAGACAACATC
TTGCAGCGGGAGAGTGAGAAGCAAAAATGGCCATGGCTCTGGCTCTTCGC
AGGCTCTCATCTTCCCTCGACAAACCCACTCGTCCTCTCTTCAATGGCTC
CTCCCTCTACTACATGTCATCTTTGCCAAATGAAGCTGTTTACGAGAAAG
AGAAAAATGGTGTCACTTGGCCAAAACAACTGAATGCTCCACTTGAGGTC
GTTGATCCTGAGATTGCTGACATTATCGAGCATGAAAAAGCACGACAATG
GAAGGGACTTGAACTCATTCCTTCAGAGAACTTTACTTCAGTATCCGTGA
TGCAAGCTGTGGGGTCTGTCATGACCAACAAGTACAGTGAAGGATATCCA
GGTGCAAGATATTATGGAGGAAACGAGTATATTGACATGGCGGAATCCTT
ATGTCAGAAGCGAGCTCTGGAAGCATTTCGGTTGGATCCTGAAAAATGGG
GAGTGAATGTGCAGTCTCTGTCTGGATCTCCATCTAATTTTCAAGTCTAC
ACTGCATTGTTAAAACCTCATGATAGGATCATGGCACTTGATCTTCCTCA
TGGTGGGCATCTCTCACACGGCTATCAGACAGATACCAAAAAGATATCTG
CAGTGTCCATATTTTTTGAGACAATGCCATACAGATTGAATGAGAGCACT
GGCTATCTAGACTATGACCCGTTGGAGAAAAGTGCCACCCTTCTTCAGGC
CAAAATTGATTGGTGCTGGGGCCAGGGCTTATGCACGATTGTACGATTAT
GAGCGTATTCCAAAGGTTTGCAACAAACAAAAAGCCATAAGGTCGGCGTA
ATG
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