EY753356

Overview
NameEY753356
Unique NameEY753356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.336e-35
Identity = 82/171 (47.95%), Postives = 111/171 (64.91%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766
            DP + +I E E  RQ   LE+I SENFTS +VM+A+GSV TNKY+EGYPG RYYGG EY D  E L  +RA E F  +     VNVQ  SGS +N  VY ALLKP+D+I+ +DL HGGHL+HG      K++A    +++  Y +N+  G++DYD +   A +++ K+  C
Sbjct:    8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTHG-----AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVC 168          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPF (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.575e-35
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            L+  DP IA +I+ E+ RQ   LELI SEN+ S  V+QA GS++TNKY+EGYPG RYYGG + +D  E+L  +RA + F  +     VNVQ  SGS +N  V+ A+L+P DRI+ + L HGGHL+HG       ++    FF+   Y L + +  LDYD +E  A
Sbjct:    3 LQNFDPAIARLIDRERNRQETHLELIASENYVSEEVLQAQGSLLTNKYAEGYPGRRYYGGCKVVDEIENLAIERARKLFGCE----YVNVQPHSGSQANQAVFLAVLEPGDRILGMSLAHGGHLTHG-----ASVNFSGKFFQAFTYGLEKDSETLDYDQMEDLA 158          

HSP 2 Score: 35.039 bits (79), Expect = 2.575e-35
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNK 827
            RPK+I AGA AY+R+ D+ R  K+C++
Sbjct:  162 RPKMIIAGASAYSRVIDFPRFRKICDE 188          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35
Identity = 82/175 (46.86%), Postives = 111/175 (63.43%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766
            L++ D E+ D I  E  RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE L ++RA + F  +     VNVQ  SGS +N  V  ++LKP DRIM LDL HGGHL+HG       ++     F+   Y ++  TG +D + +E+ A   + ++  C
Sbjct:    6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMFDARSYGVDRETGIIDMNKVEEMALDFKPRLIIC 171          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35
Identity = 77/165 (46.67%), Postives = 107/165 (64.85%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            LE  DP++A+ I HE  RQ   LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG  ++D+ E+L  +RA E F  D      NVQ  SGS +N  VY ++LKP D I+ ++L HGGHL+HG       ++    FF  +PY +++ T  +D++ +E+ A
Sbjct:    4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLA 159          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBM (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=glyA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.354e-35
Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            L+  DPE+ D+I+ E+ RQ   +ELI SENFTS+SVM+A+GS++TNKY+EGYP  RYYGG E++D  E L ++R  + F  +      NVQ  SGS +N  VY ++L+  D I+ +DL HGGHL+HG       ++     +  + Y +++ T  +DY+ L+K A
Sbjct:    6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEQLKKIA 161          

HSP 2 Score: 33.8834 bits (76), Expect = 3.354e-35
Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNK 827
            RPK+I +GA AY R+ D+++I ++C++
Sbjct:  165 RPKMIVSGASAYPRIIDFQKIREICDE 191          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.354e-35
Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            L+  DPE+ D+I+ E+ RQ   +ELI SENFTS+SVM+A+GS++TNKY+EGYP  RYYGG E++D  E L ++R  + F  +      NVQ  SGS +N  VY ++L+  D I+ +DL HGGHL+HG       ++     +  + Y +++ T  +DY+ L+K A
Sbjct:    6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIA 161          

HSP 2 Score: 33.8834 bits (76), Expect = 3.354e-35
Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNK 827
            RPK+I +GA AY R+ D+++I ++C++
Sbjct:  165 RPKMIVSGASAYPRIIDFQKIREICDE 191          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.354e-35
Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            L+  DPE+ D+I+ E+ RQ   +ELI SENFTS+SVM+A+GS++TNKY+EGYP  RYYGG E++D  E L ++R  + F  +      NVQ  SGS +N  VY ++L+  D I+ +DL HGGHL+HG       ++     +  + Y +++ T  +DY+ L+K A
Sbjct:    6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEQLKKIA 161          

HSP 2 Score: 33.8834 bits (76), Expect = 3.354e-35
Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNK 827
            RPK+I +GA AY R+ D+++I ++C++
Sbjct:  165 RPKMIVSGASAYPRIIDFQKIREICDE 191          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF5 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=glyA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.369e-35
Identity = 74/161 (45.96%), Postives = 98/161 (60.87%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            DP + D +  E  RQ   +ELI SEN+ S  VM A GSV+TNKY+EGYPG RYYGG EY+D+AE L   RALE F  +      NVQ+ SGS +N  VY ++L+P D+IM + L HGGHL+HG      K++     F+   Y +    G +DYD + + A
Sbjct:   12 DPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIAEQLAMDRALELFGAE----HANVQAHSGSQANQAVYLSVLQPGDKIMGMSLAHGGHLTHG-----AKVNVSGKLFQVAAYGVRAEDGRIDYDAMAEQA 163          

HSP 2 Score: 31.187 bits (69), Expect = 4.369e-35
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKV 818
            RPK+I AGA AY+R+ D+ RI ++
Sbjct:  167 RPKMIVAGASAYSRVIDFARIGEI 190          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF2 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=glyA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.369e-35
Identity = 74/161 (45.96%), Postives = 98/161 (60.87%), Query Frame = 2
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            DP + D +  E  RQ   +ELI SEN+ S  VM A GSV+TNKY+EGYPG RYYGG EY+D+AE L   RALE F  +      NVQ+ SGS +N  VY ++L+P D+IM + L HGGHL+HG      K++     F+   Y +    G +DYD + + A
Sbjct:   12 DPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIAEQLAMDRALELFGAE----HANVQAHSGSQANQAVYLSVLQPGDKIMGMSLAHGGHLTHG-----AKVNVSGKLFQVAAYGVRAEDGRIDYDAMAEQA 163          

HSP 2 Score: 31.187 bits (69), Expect = 4.369e-35
Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKV 818
            RPK+I AGA AY+R+ D+ RI ++
Sbjct:  167 RPKMIVAGASAYSRVIDFARIGEI 190          
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.691e-35
Identity = 74/172 (43.02%), Postives = 105/172 (61.05%), Query Frame = 2
Query:  242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757
            L  VDPE+A  ++ EK RQ   +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D  E L  +RA   F  +      NVQ  SG+ +N  VY A L+P D ++ ++L HGGHL+HG       ++    +F  + Y ++  TG +DYD + + A   + K+
Sbjct:    7 LHQVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAEGYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPGDTVLGMNLAHGGHLTHG-----SPVNISGKYFRFVAYGVDAHTGRIDYDEVARIARETKPKL 169          

HSP 2 Score: 28.8758 bits (63), Expect = 5.691e-35
Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 3
Query:  747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839
            +PKLI AGA AY R+ D+ R   + ++  A+
Sbjct:  166 KPKLIVAGASAYPRVLDFARFRAIADEVGAM 196          
The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_NITSB2.336e-3547.95Serine hydroxymethyltransferase OS=Nitratiruptor s... [more]
GLYA1_PSEPF2.575e-3545.45Serine hydroxymethyltransferase 1 OS=Pseudomonas f... [more]
GLYA_PELLD3.051e-3546.86Serine hydroxymethyltransferase OS=Pelodictyon lut... [more]
GLYA_GEOSL3.051e-3546.67Serine hydroxymethyltransferase OS=Geobacter sulfu... [more]
GLYA_CLOBM3.354e-3543.03Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CLOBJ3.354e-3543.03Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_CLOB63.354e-3543.03Serine hydroxymethyltransferase OS=Clostridium bot... [more]
GLYA_ACIF54.369e-3545.96Serine hydroxymethyltransferase OS=Acidithiobacill... [more]
GLYA_ACIF24.369e-3545.96Serine hydroxymethyltransferase OS=Acidithiobacill... [more]
GLYA_HELMI5.691e-3543.02Serine hydroxymethyltransferase OS=Heliobacterium ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCATAATCATACAACAAACAAAGAAGAAACAGACAACATC
TTGCAGCGGGAGAGTGAGAAGCAAAAATGGCCATGGCTCTGGCTCTTCGC
AGGCTCTCATCTTCCCTCGACAAACCCACTCGTCCTCTCTTCAATGGCTC
CTCCCTCTACTACATGTCATCTTTGCCAAATGAAGCTGTTTACGAGAAAG
AGAAAAATGGTGTCACTTGGCCAAAACAACTGAATGCTCCACTTGAGGTC
GTTGATCCTGAGATTGCTGACATTATCGAGCATGAAAAAGCACGACAATG
GAAGGGACTTGAACTCATTCCTTCAGAGAACTTTACTTCAGTATCCGTGA
TGCAAGCTGTGGGGTCTGTCATGACCAACAAGTACAGTGAAGGATATCCA
GGTGCAAGATATTATGGAGGAAACGAGTATATTGACATGGCGGAATCCTT
ATGTCAGAAGCGAGCTCTGGAAGCATTTCGGTTGGATCCTGAAAAATGGG
GAGTGAATGTGCAGTCTCTGTCTGGATCTCCATCTAATTTTCAAGTCTAC
ACTGCATTGTTAAAACCTCATGATAGGATCATGGCACTTGATCTTCCTCA
TGGTGGGCATCTCTCACACGGCTATCAGACAGATACCAAAAAGATATCTG
CAGTGTCCATATTTTTTGAGACAATGCCATACAGATTGAATGAGAGCACT
GGCTATCTAGACTATGACCCGTTGGAGAAAAGTGCCACCCTTCTTCAGGC
CAAAATTGATTGGTGCTGGGGCCAGGGCTTATGCACGATTGTACGATTAT
GAGCGTATTCCAAAGGTTTGCAACAAACAAAAAGCCATAAGGTCGGCGTA
ATG
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