EY753356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_NITSB (Serine hydroxymethyltransferase OS=Nitratiruptor sp. (strain SB155-2) GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.336e-35 Identity = 82/171 (47.95%), Postives = 111/171 (64.91%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766 DP + +I E E RQ LE+I SENFTS +VM+A+GSV TNKY+EGYPG RYYGG EY D E L +RA E F + VNVQ SGS +N VY ALLKP+D+I+ +DL HGGHL+HG K++A +++ Y +N+ G++DYD + A +++ K+ C Sbjct: 8 DPAVYEIFEKELQRQTDHLEMIASENFTSPAVMEAMGSVFTNKYAEGYPGKRYYGGCEYADAIEELAIQRAKELFGCE----FVNVQPHSGSQANQGVYLALLKPYDKILGMDLSHGGHLTHG-----AKVNASGKIYQSFFYGVNDE-GWIDYDRVLDIAKIVKPKLIVC 168
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPF (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.575e-35 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 L+ DP IA +I+ E+ RQ LELI SEN+ S V+QA GS++TNKY+EGYPG RYYGG + +D E+L +RA + F + VNVQ SGS +N V+ A+L+P DRI+ + L HGGHL+HG ++ FF+ Y L + + LDYD +E A Sbjct: 3 LQNFDPAIARLIDRERNRQETHLELIASENYVSEEVLQAQGSLLTNKYAEGYPGRRYYGGCKVVDEIENLAIERARKLFGCE----YVNVQPHSGSQANQAVFLAVLEPGDRILGMSLAHGGHLTHG-----ASVNFSGKFFQAFTYGLEKDSETLDYDQMEDLA 158 HSP 2 Score: 35.039 bits (79), Expect = 2.575e-35 Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPK+I AGA AY+R+ D+ R K+C++ Sbjct: 162 RPKMIIAGASAYSRVIDFPRFRKICDE 188
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35 Identity = 82/175 (46.86%), Postives = 111/175 (63.43%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKIDWC 766 L++ D E+ D I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE L ++RA + F + VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ F+ Y ++ TG +D + +E+ A + ++ C Sbjct: 6 LKMQDREVFDAIAGETVRQMETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAEDLARERARKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMFDARSYGVDRETGIIDMNKVEEMALDFKPRLIIC 171
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35 Identity = 77/165 (46.67%), Postives = 107/165 (64.85%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 LE DP++A+ I HE RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T +D++ +E+ A Sbjct: 4 LETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLA 159
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBM (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.354e-35 Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T +DY+ L+K A Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEQLKKIA 161 HSP 2 Score: 33.8834 bits (76), Expect = 3.354e-35 Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPK+I +GA AY R+ D+++I ++C++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.354e-35 Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T +DY+ L+K A Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIA 161 HSP 2 Score: 33.8834 bits (76), Expect = 3.354e-35 Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPK+I +GA AY R+ D+++I ++C++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 3.354e-35 Identity = 71/165 (43.03%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T +DY+ L+K A Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEQLKKIA 161 HSP 2 Score: 33.8834 bits (76), Expect = 3.354e-35 Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPK+I +GA AY R+ D+++I ++C++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF5 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.369e-35 Identity = 74/161 (45.96%), Postives = 98/161 (60.87%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 DP + D + E RQ +ELI SEN+ S VM A GSV+TNKY+EGYPG RYYGG EY+D+AE L RALE F + NVQ+ SGS +N VY ++L+P D+IM + L HGGHL+HG K++ F+ Y + G +DYD + + A Sbjct: 12 DPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIAEQLAMDRALELFGAE----HANVQAHSGSQANQAVYLSVLQPGDKIMGMSLAHGGHLTHG-----AKVNVSGKLFQVAAYGVRAEDGRIDYDAMAEQA 163 HSP 2 Score: 31.187 bits (69), Expect = 4.369e-35 Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKV 818 RPK+I AGA AY+R+ D+ RI ++ Sbjct: 167 RPKMIVAGASAYSRVIDFARIGEI 190
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ACIF2 (Serine hydroxymethyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.369e-35 Identity = 74/161 (45.96%), Postives = 98/161 (60.87%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 DP + D + E RQ +ELI SEN+ S VM A GSV+TNKY+EGYPG RYYGG EY+D+AE L RALE F + NVQ+ SGS +N VY ++L+P D+IM + L HGGHL+HG K++ F+ Y + G +DYD + + A Sbjct: 12 DPVLWDAMRKEARRQEDHVELIASENYASPMVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIAEQLAMDRALELFGAE----HANVQAHSGSQANQAVYLSVLQPGDKIMGMSLAHGGHLTHG-----AKVNVSGKLFQVAAYGVRAEDGRIDYDAMAEQA 163 HSP 2 Score: 31.187 bits (69), Expect = 4.369e-35 Identity = 13/24 (54.17%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKV 818 RPK+I AGA AY+R+ D+ RI ++ Sbjct: 167 RPKMIVAGASAYSRVIDFARIGEI 190
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.691e-35 Identity = 74/172 (43.02%), Postives = 105/172 (61.05%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 L VDPE+A ++ EK RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D E L +RA F + NVQ SG+ +N VY A L+P D ++ ++L HGGHL+HG ++ +F + Y ++ TG +DYD + + A + K+ Sbjct: 7 LHQVDPEVAAAMDREKKRQKNNIELIASENFVSEAVMEAAGSVLTNKYAEGYPGKRYYGGCEFVDQVERLAIERAKRLFGAE----HANVQPHSGANANMGVYFACLEPGDTVLGMNLAHGGHLTHG-----SPVNISGKYFRFVAYGVDAHTGRIDYDEVARIARETKPKL 169 HSP 2 Score: 28.8758 bits (63), Expect = 5.691e-35 Identity = 13/31 (41.94%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNKQKAI 839 +PKLI AGA AY R+ D+ R + ++ A+ Sbjct: 166 KPKLIVAGASAYPRVLDFARFRAIADEVGAM 196 The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bpback to top |