EY753356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_GEOTN (Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.691e-35 Identity = 72/168 (42.86%), Postives = 105/168 (62.50%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 DP++ IE E+ RQ +ELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG EY+D+ E L ++RA + F + NVQ SG+ +N VY +LKP D ++ ++L HGGHL+HG ++ + + + Y ++ T +DYD + + A L + K+ Sbjct: 8 DPQVFATIEQERKRQHAKIELIASENFVSRAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVVEDLARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLKPGDTVLGMNLSHGGHLTHG-----SPVNFSGVQYNFVEYGVDPETHVIDYDDVREKARLHRPKL 166 HSP 2 Score: 29.261 bits (64), Expect = 5.691e-35 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPKLI AGA AY R+ D+ + ++ ++ Sbjct: 163 RPKLIVAGASAYPRVIDFAKFREIADE 189
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35 Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 LE DP +A+ I HE RQ LELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG ++D+ E+L +RA E F D NVQ SGS +N VY ++LKP D I+ ++L HGGHL+HG ++ FF +PY +++ T +D++ +E+ A Sbjct: 4 LETFDPAVAEAIRHETERQEYNLELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKELFGAD----HANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLA 159
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35 Identity = 80/172 (46.51%), Postives = 104/172 (60.47%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 L+ DPEI +I+ E+ RQ + LI SEN+ S +V++A GS++TNKYSEGYPG RYY G + ID ES+ RA F + VNVQ SGSP+N VY A LKP D I+ + LPHGGHL+HG K+S +F + Y LNE G LDY+ + A + KI Sbjct: 13 LQQQDPEIFSLIQQEEVRQHNKIRLIASENYVSSAVLEATGSILTNKYSEGYPGKRYYEGQQLIDQIESIAIDRAKAVFGAE----HVNVQPYSGSPANMAVYLAFLKPGDTILGMALPHGGHLTHG-----SKVSISGKYFNAVSYALNEE-GILDYEEIRNKALECKPKI 174
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_FLAPJ (Serine hydroxymethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=glyA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 7.410e-35 Identity = 76/168 (45.24%), Postives = 100/168 (59.52%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSATLLQAKI 757 D +I D+I E+ RQ GLELI SENF S VM+A GSV+TNKY+EGYPG RYYGG E +D+ E + RA + F + NVQ SGS +N V+ A LKP D I+ DL HGGHL+HG ++ + Y + TG L+YD +++ AT Q K+ Sbjct: 4 DQQIFDLIIEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGCEVVDVIEQIAIDRAKDLFGAE----YANVQPHSGSQANTAVFAACLKPGDTILGFDLSHGGHLTHG-----SPVNFSGKLYNPTFYGVEPETGMLNYDKIQEIATKEQPKL 162 HSP 2 Score: 32.7278 bits (73), Expect = 7.410e-35 Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNKQKAIRSA 848 +PKLI AGA AY+R D+ER K+ + AI A Sbjct: 159 QPKLIIAGASAYSRDMDFERFRKIADSVGAILMA 192
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBH (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.412e-35 Identity = 70/165 (42.42%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+++GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T +DY+ L+K A Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIA 161 HSP 2 Score: 33.8834 bits (76), Expect = 7.412e-35 Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPK+I +GA AY R+ D+++I ++C++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB1 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.412e-35 Identity = 70/165 (42.42%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 242 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+++GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T +DY+ L+K A Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIA 161 HSP 2 Score: 33.8834 bits (76), Expect = 7.412e-35 Identity = 12/27 (44.44%), Postives = 22/27 (81.48%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNK 827 RPK+I +GA AY R+ D+++I ++C++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_UNCTG (Serine hydroxymethyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=glyA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.257e-34 Identity = 73/158 (46.20%), Postives = 98/158 (62.03%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLE 727 D EI D++ E RQ + +ELI SEN S SVM+A GS +TNKY+EGYPG RYYGG E +D+AE++ +RA + F NVQ SG+ +NF + ALLKP D IM L L HGGHL+HG + +F + Y ++E TG +DY+ +E Sbjct: 8 DIEIHDMLVKELKRQRETIELIASENIASQSVMEAQGSCLTNKYAEGYPGKRYYGGCEVVDIAETIAIERAKKLFNAR----FANVQPHSGAQANFAILLALLKPGDTIMGLSLSHGGHLTHG-----SPFNVSGKWFNVISYSVSEKTGCIDYNEIE 156 HSP 2 Score: 34.6538 bits (78), Expect = 1.257e-34 Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 747 RPKLIGAGARAYARLYDYERIPKVCNKQKA 836 +PKLI +GA AY+R++D+ERI + K A Sbjct: 163 KPKLIISGASAYSRIWDWERISGIAKKVSA 192
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SHISS (Serine hydroxymethyltransferase OS=Shigella sonnei (strain Ss046) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG++DY LEK A Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SHIFL (Serine hydroxymethyltransferase OS=Shigella flexneri GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG++DY LEK A Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SHIF8 (Serine hydroxymethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34 Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 Query: 254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736 D E+ +E EK RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA E F D NVQ SGS +NF VYTALL+P D ++ ++L HGGHL+HG ++ + +PY + ++TG++DY LEK A Sbjct: 12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162 The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bpback to top |