EY753356

Overview
NameEY753356
Unique NameEY753356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SHIDS (Serine hydroxymethyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFTVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SHIBS (Serine hydroxymethyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_SHIB3 (Serine hydroxymethyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOUT (Serine hydroxymethyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=glyA PE=3 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOSM (Serine hydroxymethyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOSE (Serine hydroxymethyltransferase OS=Escherichia coli (strain SE11) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOLI (Serine hydroxymethyltransferase OS=Escherichia coli (strain K12) GN=glyA PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOLC (Serine hydroxymethyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOL6 (Serine hydroxymethyltransferase OS=Escherichia coli O6 GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
[Close]
BLAST of EY753356 vs. ExPASy Swiss-Prot
Match: GLYA_ECOL5 (Serine hydroxymethyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glyA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.514e-34
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2 
Query:  254 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYLDYDPLEKSA 736
            D E+   +E EK RQ + +ELI SEN+TS  VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L   RA E F  D      NVQ  SGS +NF VYTALL+P D ++ ++L HGGHL+HG       ++     +  +PY + ++TG++DY  LEK A
Sbjct:   12 DAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD----YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPVNFSGKLYNIVPYGI-DATGHIDYADLEKQA 162
The following BLAST results are available for this feature:
BLAST of EY753356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_SHIDS1.514e-3449.07Serine hydroxymethyltransferase OS=Shigella dysent... [more]
GLYA_SHIBS1.514e-3449.07Serine hydroxymethyltransferase OS=Shigella boydii... [more]
GLYA_SHIB31.514e-3449.07Serine hydroxymethyltransferase OS=Shigella boydii... [more]
GLYA_ECOUT1.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOSM1.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOSE1.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOLI1.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOLC1.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOL61.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]
GLYA_ECOL51.514e-3449.07Serine hydroxymethyltransferase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753356 ID=EY753356; Name=EY753356; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCATAATCATACAACAAACAAAGAAGAAACAGACAACATC
TTGCAGCGGGAGAGTGAGAAGCAAAAATGGCCATGGCTCTGGCTCTTCGC
AGGCTCTCATCTTCCCTCGACAAACCCACTCGTCCTCTCTTCAATGGCTC
CTCCCTCTACTACATGTCATCTTTGCCAAATGAAGCTGTTTACGAGAAAG
AGAAAAATGGTGTCACTTGGCCAAAACAACTGAATGCTCCACTTGAGGTC
GTTGATCCTGAGATTGCTGACATTATCGAGCATGAAAAAGCACGACAATG
GAAGGGACTTGAACTCATTCCTTCAGAGAACTTTACTTCAGTATCCGTGA
TGCAAGCTGTGGGGTCTGTCATGACCAACAAGTACAGTGAAGGATATCCA
GGTGCAAGATATTATGGAGGAAACGAGTATATTGACATGGCGGAATCCTT
ATGTCAGAAGCGAGCTCTGGAAGCATTTCGGTTGGATCCTGAAAAATGGG
GAGTGAATGTGCAGTCTCTGTCTGGATCTCCATCTAATTTTCAAGTCTAC
ACTGCATTGTTAAAACCTCATGATAGGATCATGGCACTTGATCTTCCTCA
TGGTGGGCATCTCTCACACGGCTATCAGACAGATACCAAAAAGATATCTG
CAGTGTCCATATTTTTTGAGACAATGCCATACAGATTGAATGAGAGCACT
GGCTATCTAGACTATGACCCGTTGGAGAAAAGTGCCACCCTTCTTCAGGC
CAAAATTGATTGGTGCTGGGGCCAGGGCTTATGCACGATTGTACGATTAT
GAGCGTATTCCAAAGGTTTGCAACAAACAAAAAGCCATAAGGTCGGCGTA
ATG
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