EY753316

Overview
NameEY753316
Unique NameEY753316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: SUB2_ASPCL (ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus GN=sub2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 201
            + INYD+P  AD+YLHRVGRAGRFGTKGL+I+FVS+  D  +L +++ RFEV + E PE  +D+STYM
Sbjct:  373 LAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEIEKRFEVALPEYPEGGVDSSTYM 440          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: SUB2_AJECN (ATP-dependent RNA helicase SUB2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SUB2 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 201
            + INYD+P  AD+YLHRVGRAGRFGTKGLAI+FVSS  D ++L  ++ RFEV + E P+  +D+S YM
Sbjct:  374 LAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEKRFEVALPEYPQGGVDSSAYM 441          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: SUB2_ASPOR (ATP-dependent RNA helicase sub2 OS=Aspergillus oryzae GN=sub2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 201
            + INYD+P  AD+YLHRVGRAGRFGTKGL+I+FVS+  D  +L  ++ RFEV + E PE  +D+STYM
Sbjct:  373 LAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEEDEKVLKDIEKRFEVALPEYPEGGVDSSTYM 440          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: SUB2_ASPNC (ATP-dependent RNA helicase sub2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sub2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 201
            + INYD+P  AD+YLHRVGRAGRFGTKGL+I+FVS+  D  +L  ++ RFEV + E PE  +D+STYM
Sbjct:  372 LAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVLKDIEKRFEVALPEYPEGGVDSSTYM 439          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: SUB2_PHANO (ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum GN=SUB2 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.618e-17
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 201
            + INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS  D  +L  ++ RF  +I E PE  I +++YM
Sbjct:  369 VAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSQDDEAVLKAIEERFAAEIPEFPEDGISSASYM 436          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: SUB2_SCLS1 (ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=sub2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.053e-16
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTY 198
            + INYD+P  AD+YLHRVGRAGRFGTKGLAI+FVS+ +D ++L  V+ RFEV + E PE  +D++ Y
Sbjct:  374 LAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQEVLKAVEKRFEVALPEYPEGGVDSAAY 440          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.874e-11
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 201
            +VIN+D P +A+TYLHR+GR+GRFG +GLAI+F+S A D   L +++     +I+ +P  ID S Y+
Sbjct:  352 VVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWA-DRFNLYRIENELGTEIQPIPPSIDPSLYV 417          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: IF4A_LEIMA (Probable eukaryotic initiation factor 4A OS=Leishmania major GN=LMJ_0078 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.060e-11
Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 201
            IVIN+D+P + + YLHR+GR GR+G KG+AI FV+   D ++L++++A +   I ELP  +D + Y+
Sbjct:  338 IVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTE-KDVELLHEIEAHYHTQIDELP--VDFAAYL 401          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: IF4A_LEIIN (Probable eukaryotic initiation factor 4A OS=Leishmania infantum GN=LinJ01.0780 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.060e-11
Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 201
            IVIN+D+P + + YLHR+GR GR+G KG+AI FV+   D ++L++++A +   I ELP  +D + Y+
Sbjct:  338 IVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTE-KDVELLHEIEAHYHTQIDELP--VDFAAYL 401          
BLAST of EY753316 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.609e-11
Identity = 29/67 (43.28%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 IVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 201
            IVIN+D+P + + YLHR+GR GR+G KG+AI FV+   D ++L ++++ +   I+ELP  +D + Y+
Sbjct:  339 IVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTQ-KDVEVLREIESHYHTQIEELP--VDFAAYL 402          
The following BLAST results are available for this feature:
BLAST of EY753316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SUB2_ASPCL1.624e-1760.29ATP-dependent RNA helicase sub2 OS=Aspergillus cla... [more]
SUB2_AJECN2.121e-1760.29ATP-dependent RNA helicase SUB2 OS=Ajellomyces cap... [more]
SUB2_ASPOR2.770e-1760.29ATP-dependent RNA helicase sub2 OS=Aspergillus ory... [more]
SUB2_ASPNC2.770e-1760.29ATP-dependent RNA helicase sub2 OS=Aspergillus nig... [more]
SUB2_PHANO3.618e-1760.29ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria n... [more]
SUB2_SCLS11.053e-1659.70ATP-dependent RNA helicase sub2 OS=Sclerotinia scl... [more]
DHH1_SCHPO3.874e-1147.76Putative ATP-dependent RNA helicase ste13 OS=Schiz... [more]
IF4A_LEIMA5.060e-1144.78Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_LEIIN5.060e-1144.78Probable eukaryotic initiation factor 4A OS=Leishm... [more]
IF4A_TRYBB6.609e-1143.28Probable eukaryotic initiation factor 4A OS=Trypan... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753316 ID=EY753316; Name=EY753316; organism=Citrus sinensis; type=EST; length=543bp
ATTGTCATCAATTATGACATGCCAGATTCTGCTGATACTTATCTGCACAG
GGTTGGTAGAGCTGGTAGGTTTGGCACCAAGGGCCTTGCAATTACTTTTG
TATCATCTGCTTCAGACTCCGATATTCTCAATCAGGTTCAGGCAAGGTTT
GAAGTAGATATAAAGGAGCTTCCTGAGCAGATTGATACATCTACATACAT
GCCATCATAGTGGAGATCTGTTCTCTGATGTGGAAAATTTGAGGCGCATG
TGGAAGCAGGGTGCTGAAGGCCCTTTATGTATTTGTTTCTTTAGATGAAG
TCCAATGGCTTTCATATATGTTGCCTTGGAGATTTGTCAGATGGATCCCT
CTATTTTGTGGTTTTACGCTGCCTTTTCTTGTTTTTGGGATTTGTAGCCT
TTTAATACCTTCTGGGTACTGCTGCTATTGGGAATGTTATTCAACTGGTA
CCTTGGCTTGTATTAGAGTTCCTTGTGAGATAATTNTTATTGCACTGTTA
ATCGATTAGATTCTTAGACACCAAAAAAAAAAAAAAAAAAAAA
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