EY753296

Overview
NameEY753296
Unique NameEY753296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 7.692e-52
Identity = 103/204 (50.49%), Postives = 132/204 (64.71%), Query Frame = 2
Query:   32 INMSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            +  S TAG++I CKAAVAW+   PL IE V+V PP+ +EVR+KI+ + +CHTD Y    K    LFP I GHE  GIVESVG  VT +Q GD V+ ++T ECK C  C S ++N+C  +R    +G+M  DG SRFS  G  + HF+G STFSEYTV     V  I   APLD VC+L CGI+TG+GA    A  K+G +VA+F
Sbjct:    1 MQQSPTAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLM-PDGTSRFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVF 203          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 8.625e-52
Identity = 96/203 (47.29%), Postives = 137/203 (67.49%), Query Frame = 2
Query:   44 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR---INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            GT G+VI+CKAA+AW+ G PL IEE+EV+PP+  EVR++++ T +C TD+   + K +  LFP + GHE  GIVESVG GVT+ +PGD V+P F  +CK C  C S  +N+C  LR     T    ++ D  SRF+ KG+ IYHF+G S+FS+YTV     +A+++  A L++VC++ CG S+G+GA +N AK   G T A+F
Sbjct:    2 GTQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVF 203          

HSP 2 Score: 25.7942 bits (55), Expect = 8.625e-52
Identity = 13/45 (28.89%), Postives = 21/45 (46.67%), Query Frame = 1
Query:  622 GPDCCHFWIGCXWPXXXXXXXVSGASXIIGC*XDPSRFNEPRSLG 756
            G  C  F +GC          ++GAS II    +  +F + ++LG
Sbjct:  197 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 241          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.714e-51
Identity = 106/224 (47.32%), Postives = 139/224 (62.05%), Query Frame = 2
Query:   47 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXXYQGLPXSLGVD 718
            TAG+VI+CKAAV W   +P  IE++EVAPP+  EVR+KIL T +C TD +  +       FP I GHEA GIVESVGE VT ++PGD V+P+F  +C+EC  C + E N+C    + T RGV+  DG +RF+ KGKP+ HF+ TSTF+EYTV     VAKI+  AP +K C++ CG STG+GA V  AK   G T A+F                G    +G+D
Sbjct:    3 TAGKVIKCKAAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGT-MVSKFPVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIRSDL-TGRGVLA-DGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGID 223          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 94/194 (48.45%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A  + VC+L CG++TG GA  N AK + G +VA+F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 96/194 (49.48%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  G PL I E++VAPP+K EV +KI  T +CHTD Y         LFP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +GVM  D  SRF + G+P+YH++G STFSEYTV     +AKINP A  ++VC+L CG++TG GA  N AK ++G +VA+F
Sbjct:    1 MKSRAAVAFGPGLPLEIVEIDVAPPKKGEVLVKISHTGVCHTDAYTLSGDDPEGLFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGVM-PDATSRFFVNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVF 193          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 94/194 (48.45%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A  + VC+L CG++TG GA  N AK + G +VA+F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 94/194 (48.45%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A  + VC+L CG++TG GA  N AK + G +VA+F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 94/194 (48.45%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A  + VC+L CG++TG GA  N AK + G +VA+F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 94/194 (48.45%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A  + VC+L CG++TG GA  N AK + G +VA+F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
BLAST of EY753296 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.923e-51
Identity = 94/194 (48.45%), Postives = 132/194 (68.04%), Query Frame = 2
Query:   62 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIF 643
            ++ +AAVA+  GKPL I E++VAPP+K EV +K+  T +CHTD +         +FP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  DG +RFS  G+P+YH++G STFSEYTV     +AKINP A  + VC+L CG++TG GA  N AK + G +VA+F
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVF 193          
The following BLAST results are available for this feature:
BLAST of EY753296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
FADH2_SCHPO7.692e-5250.49Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH4_MOUSE8.625e-5247.29Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH7_RAT1.714e-5147.32Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
FRMA_SHISS2.923e-5148.45S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_PASPI2.923e-5149.48S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
FRMA_ECOUT2.923e-5148.45S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLI2.923e-5148.45S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC2.923e-5148.45S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL52.923e-5148.45S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK12.923e-5148.45S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-B08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753296 ID=EY753296; Name=EY753296; organism=Citrus sinensis; type=EST; length=830bp
CCACGCGTCCGTGAGAGTATCATCATTCATCATCAATATGTCTGGCACAG
CTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAG
CCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGT
TCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTACTTCT
GGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCATGAA
GCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACC
AGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTGCAAGGAATGTCCTC
ACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCCGGATCAATACT
GACAGGGGTGTTATGATTAATGATGGTCAGTCAAGGTTCTCGATTAAGGG
GAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATACACTG
TTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGAC
AAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGTTTTGGGGCTACTGT
TAATGTTGCCAAACCGAAGAAGGGCCAGACTGTTGCCATTTTTGGATTGG
GTGCAGNTGGCCTTGCTGCTGCCGAAGGGGCAGAGTATCAGGGGCTTCCA
NGATCATTGGGTGTTGATTNGACCCCAGCAGATTCAATGAGCCAAGAAGT
TTGGGGTAACCGAGTTGGTAATTCAAAAGATATGACCAACCTGTTCAACA
GTGATGGCTGAATGACCATGGGGGAGTGGG
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