EY753294

Overview
NameEY753294
Unique NameEY753294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4042 contig Csv1_Contig4042:1112..1930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753294 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.217e-19
Identity = 62/182 (34.07%), Postives = 97/182 (53.30%), Query Frame = 3
Query:   18 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 563
            L++  KP++ +++R D  KN+T LV+ +G+   LREL NL ++ G  D          + +  + +L+  Y L G   +     N+A   E+YR  A  KG F+ PA  E FGLT++EA   GLP  AT +GGP +I     +G  +DP+  DQ A  +AD   K   + + W++    GL+
Sbjct:  483 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPH--DQNA--IADALLKLVADKNLWQECRRNGLR 659          
BLAST of EY753294 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.217e-19
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 3
Query:   21 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 563
            S+  KP++ ++AR D  KN+T LV+ +G+   LREL NL ++ G  D          + +  + +++  Y L G   +      ++   ++YR  A TKG F+ PAF E FGLT++EA   GLP  AT +GGP +I     +G  +DP++     E +AD   K       W K    GLK
Sbjct:  470 SNPRKPMILALARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKYDLYGLVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHN----QESIADALLKLVAEKHLWAKCRANGLK 645          
BLAST of EY753294 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.181e-18
Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   18 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 563
            L++  KP++ +++R D  KN+T LV+ +G+   LREL NL+++ G  D          + +  + +L+  Y L G   +      ++   E+YR     KG F+ PA  E FGLT++EA   GLP  AT +GGP +I     +G  +DP+  DQ A  +AD   K   + + W++    GL+
Sbjct:  497 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLILIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPH--DQHA--IADALLKLVADKNLWQECRKNGLR 673          
BLAST of EY753294 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.181e-18
Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   18 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 563
            L++  KP++ +++R D  KN+T LV+ +G+   LREL NL+++ G  D          + +  + +L+  Y L G   +      ++   E+YR     KG F+ PA  E FGLT++EA   GLP  AT +GGP +I     +G  +DP+  DQ A  +AD   K   + + W++    GL+
Sbjct:  497 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLILIMGNRDDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPH--DQHA--IADALLKLVADKNLWQECRKNGLR 673          
The following BLAST results are available for this feature:
BLAST of EY753294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SPS_MAIZE2.217e-1934.07Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS1_CRAPL2.217e-1933.70Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
SPS_ORYSJ4.181e-1832.42Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI4.181e-1832.42Probable sucrose-phosphate synthase OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-B06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753294 ID=EY753294; Name=EY753294; organism=Citrus sinensis; type=EST; length=821bp
CCACGCGTCCGGGTACATTGAGTGATCGGTCGAAGCCCATTGTCTTTTCC
ATGGCGAGGCTTGACCATGTGAAAAACATGACAGGGTTGGTTGAGTGCTA
TGGTAAGAATAGCCAACTGAGGGAACTGGTTAACCTTGTAGTGGTAGCTG
GTTACATAGATGTAAATAAGTCCAAAGACAGAGAAGAGATAGCAGAAATT
GAGAAGATGCATGAGCTTATGAAGACGTACAAGTTGGATGGTCAGTTTCG
TTGGATAGCAGCTCAAACAAATAGGGCACGTAATGGCGAGCTCTATCGCT
ATATAGCCGACACCAAAGGTGCTTTTGTGCAGCCTGCTTTTTATGAAGCT
TTTGGATTAACAGTTGTGGAAGCTATGACTTGTGGACTTCCGACATTCGC
CACTTGCCATGGTGGTCCTGCAGAGATTATCGAGCATGGTGCGTCAGGGT
TCCATATTGATCCATATCACCCTGATCAAGCTGCTGAACTCATGGCAGAT
TTCTTTGGAAAGTGCAAGGAAAATCCAAGCCATTGGAAAAAAATCTCTGA
TGGAGGGCTTAAAAGGGATTTATGAAAGTACACCTGNAAGATTTATTCTG
AAAGGCTAATGACATTGGCTGGGGTATATGGTTTNCTGGAAGTATGTTTC
AAAACTTGAGAGGCGTGAGACCCGGAGGTACTTTGAGAATGTCTACATTC
TAAAAGTTCGTGATTTGGTGAAAGTCTGTTCTTTTGGCAAGTGAGAACCA
ACATTAAGCTGCTGGTATTCAAGGAACTGCTTATAATACCCAGCTACCTC
CCGTACCTTAGTGCAAAAATA
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