EY753292

Overview
NameEY753292
Unique NameEY753292
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13085 contig Csv1_Contig13085:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  467 EALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGVHLSGY 805
            +A   +L+ L +DYVDLYLIHWPA    G  G             +W  +      G AR+IGVCNF+ + L ++++++   PA+NQ+E HP   Q +L       G+    Y
Sbjct:   96 DAARASLERLGLDYVDLYLIHWPA----GDHG---------KYIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAY 195          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  467 EALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGVHLSGY 805
            +A   +L+ L +DYVDLYLIHWPA    G  G             +W  +      G AR+IGVCNF+ + L ++++++   PA+NQ+E HP   Q +L       G+    Y
Sbjct:   96 DAARASLERLGLDYVDLYLIHWPA----GDHG---------KYIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAY 195          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.069e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  467 EALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGVHLSGY 805
            +A   +L+ L +DYVDLYLIHWPA    G  G             +W  +      G AR+IGVCNF+ + L ++++++   PA+NQ+E HP   Q +L       G+    Y
Sbjct:   96 DAARASLERLGLDYVDLYLIHWPA----GDHG---------KYIDSWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGIVTEAY 195          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 43/118 (36.44%), Postives = 57/118 (48.31%), Query Frame = 2
Query:  467 EALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGVHLSGYPHWVL 820
            +A + +L  L +DYVDLYLIHWPA      VG              W  M      G AR+IGVCNF+ + L  ++++  V PAVNQ+E HP   Q ++        V    Y   VL
Sbjct:   95 DACNASLDRLGMDYVDLYLIHWPAP----PVG---------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRKSNAQHNVITQSYTPLVL 199          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11
Identity = 43/118 (36.44%), Postives = 57/118 (48.31%), Query Frame = 2
Query:  467 EALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGVHLSGYPHWVL 820
            +A + +L  L +DYVDLYLIHWPA      VG              W  M      G AR+IGVCNF+ + L  ++++  V PAVNQ+E HP   Q ++        V    Y   VL
Sbjct:   95 DACNASLDRLGMDYVDLYLIHWPAP----PVG---------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRKSNAQHNVITQSYTPLVL 199          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2
Query:  470 ALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGV 790
            A + ++  L +DY+DLYLIHWP           PE  L +D   T+RA   L + G+ R+IGV NF  + L  L++   + PAVNQ+E HP   Q++L       G+
Sbjct:   89 AFEASVDRLGVDYLDLYLIHWPV----------PEKNLFVD---TFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGI 182          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: AKCL1_HUMAN (Aldo-keto reductase family 1 member C-like protein 1 OS=Homo sapiens GN=AKR1CL1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 37/86 (43.02%), Postives = 48/86 (55.81%), Query Frame = 1
Query:   49 ESGYFELNTGAKMPSVGLGTWQAD---PGVVGNAVDVAIKAGYRHIDCARLYLNEKEIGFVLKKLFEDGVVKREDLWITSKLWFVF 297
            +S    LN G  MP +G GT+  D         A  VAI  G+RHID A LY NE+E+G  + +   DG VKRE+++ T KLW  F
Sbjct:    7 QSHSVRLNDGPFMPVLGFGTYAPDHTPKSQAAEATKVAIDVGFRHIDSAYLYQNEEEVGQAIWEKIADGTVKREEIFYTIKLWATF 92          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 42/127 (33.07%), Postives = 59/127 (46.46%), Query Frame = 2
Query:  440 TDLAPKDV-----PEALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGVHLSGY 805
            T LA +D       +AL  +L+ L +DYVDLYLIHWP   +   V              +W  +    + G  R+IGV NF    L D++ ++   PAVNQ+E HP   Q +L       G+    Y
Sbjct:   78 TKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWPVSQQGKHV-------------DSWGGLMKSKEVGLTRSIGVANFHGHHLDDIISLSFFTPAVNQIELHPLLNQAELRAVNAEHGIATEAY 191          
BLAST of EY753292 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 2
Query:  470 ALDNTLQDLRIDYVDLYLIHWPARMKKGSVGFNPENLLPLDIPSTWRAMEALYDSGKARAIGVCNFSTKKLGDLLEIARVPPAVNQVECHPSWQQQKLHTFCKSKGV 790
            A + ++  L +DY+DLYLIHWP           PE  L +D   T++A   L + G+ R+IGV NF  + L  L++   + PAVNQ+E HP   Q++L       G+
Sbjct:   89 AFEASVDRLGVDYLDLYLIHWPV----------PEKNLFVD---TFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQIELHPLLPQRELRELHAQLGI 182          
The following BLAST results are available for this feature:
BLAST of EY753292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
Y1984_MYCSK1.069e-1134.51Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS1.069e-1134.51Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
Y1918_MYCSJ1.069e-1134.51Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
Y1669_MYCLE1.823e-1136.44Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB1.823e-1136.44Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
Y1919_MYCSJ2.381e-1137.38Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
AKCL1_HUMAN4.061e-1143.02Aldo-keto reductase family 1 member C-like protein... [more]
Y4205_MYCGI5.304e-1133.07Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
Y1985_MYCSK5.304e-1136.45Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-B04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753292 ID=EY753292; Name=EY753292; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGGNAAATATCGCCTCTTCGAACTGCGGAAATGGCGAATGA
AAGCGGATACTTTGAGCTGAATACAGGCGCCAAAATGCCTTCCGTTGGAT
TGGGCACGTGGCAGGCTGATCCTGGTGTTGTCGGTAACGCCGTTGATGTC
GCCATCAAGGCTGGGTACCGCCATATAGATTGTGCTCGACTCTATCTCAA
TGAGAAGGAGATTGGTTTTGTGCTGAAGAAACTGTTTGAAGATGGCGTGG
TCAAGCGTGAGGATTTATGGATTACCTCCAAACTCTGGTTTGTCTTTGTC
TTAGTTGTTGGTTTGATTGAGTGGGAACACACTATGGATGGTTGAGTGCA
ACAACTCGAAATGATTTAGCTGGTGCACTGACTCATTAAACTGCCAAGGA
ATGTTCGTACTATCTAAATTTGTCATGATTCACAGGTGTACTGATCTTGC
ACCAAAAGACGTACCAGAGGCATTAGACAATACTTTACAGGACTTGCGGA
TTGATTATGTTGATTTATATCTTATCCACTGGCCAGCTCGGATGAAGAAG
GGGTCTGTTGGCTTCAATCCTGAAAACCTTCTTCCACTAGATATACCTAG
CACATGGAGAGCAATGGAGGCGTTATATGACTCTGGCAAGGCTCGAGCTA
TTGGAGTGTGCAATTTCTCTACGAAGAAGCTTGGAGATTTATTGGAAATA
GCTCGTGTTCCTCCAGCTGTTAATCAAGTGGAATGCCATCCTTCATGGCA
GCAGCAAAAGCTACATACATTCTGTAAATCCAAAGGAGTTCACCTGTCTG
GATATCCCCATTGGGTCCTCCCGGCCAAGGGGGATCAGAAGGATGTACTC
ATTCACCCAT
back to top