EY753281

Overview
NameEY753281
Unique NameEY753281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753281 vs. ExPASy Swiss-Prot
Match: VA0D2_DROME (Probable V-type proton ATPase subunit d 2 OS=Drosophila melanogaster GN=CG4624 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.293e-40
Identity = 85/210 (40.48%), Postives = 131/210 (62.38%), Query Frame = 2 
Query:   80 AMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTL-KLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFF*CITSEDLDDMDIEXMRDTLYRHT*KTFTSFVRTWGGATAEIMSDLLAF 706
            +M FN   GYLEA+ RG++ G+L  +DY NL QCE+L+D+ + +  T+YG     E S   +  ++E+C   +L+ +Y ++   +TEPL+TF+E+I Y  MIDNV L+V G  + R ++ LL  CHPLG FD +  + VA N  EL+  VL+DTP+A +    +  E L  +D+E +R  LYR   + F ++    GG TA +M++LL+F
Sbjct:    2 SMIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSA-PSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLGGNTANVMTNLLSF 210
The following BLAST results are available for this feature:
BLAST of EY753281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
VA0D2_DROME2.293e-4040.48Probable V-type proton ATPase subunit d 2 OS=Droso... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-A04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753281 ID=EY753281; Name=EY753281; organism=Citrus sinensis; type=EST; length=824bp
CCACGCGTCCGCTCANATCACATCACAACGAACAAACAATCGCACCGCTC
TCTCCTTCGCGAAGATGTACGGGTTCGAAGCGATGACGTTTAACATACAC
GGCGGATACTTGGAGGCGATCGTGAGGGGCTACCGTGCGGGGCTCTTGAC
GGCCGCCGATTACAACAATTTGTGCCAGTGCGAAACACTTGACGACATCA
AGATGCACCTCTCCGCCACCGAATATGGTCCTTACCTCCAAAACGAACCT
TCCCCATTGCATACTACTACAATTGTGGAGAAATGCACTCTGAAACTGGT
TGATGAGTATAAGCACATGCTGTGCCAAGCCACTGAGCCCCTGTCAACAT
TTTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCTTGATT
GTTACTGGAACCTTGCATGAGAGAGATGTTCAAGAACTGTTGGAGAAATG
TCACCCTTTGGGCATGTTTGACAGCATTGCTACACTGGCGGTTGCTCAGA
ACATGCGGGAGCTTTATAGATTGGTGCTTGTTGATACACCATTAGCACCA
TACTTTTTCTGATGTATCACATCAGAGGACTTGGATGACATGGACATTGA
ANNTATGAGGGATACTCTCTACAGGCATACCTAGAAGACTTTTACAAGTT
TTGTCAGAACTTGGGGTGGTGCAACAGCTGAAATCATGTCTGACCTTCTA
GCTTTTGGAGGCCGACAGAAAAGCTGTCAATTTCACCATAAACAGCATTG
GCACTGAGCTAACCCGAAATGATCGCCGGAAATGGCACTCCAACTTTGGT
TTACTTTTCCCTATGGGCAAGGAG
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