EY753279

Overview
NameEY753279
Unique NameEY753279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 1.470e-77
Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDRDRV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLRQRHWYIQSTCATSGEGLYEGLDWLSN I
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNQI 177

HSP 2 Score: 115.161 bits (287), Expect = 1.470e-77
Identity = 56/66 (84.85%), Postives = 60/66 (90.91%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            + S +FAKKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 1.469e-74
Identity = 91/109 (83.49%), Postives = 98/109 (89.91%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATKPK 697
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RMLNEDELRDAVLLVFANKQDLPNAMN AEITDKL LHSLR R WYIQ+TCATSG+GLYEGLDWLS T+  + K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSTTLKNRSK 182

HSP 2 Score: 112.079 bits (279), Expect = 1.469e-74
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 1 
Query:  184 IFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.469e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVF NKQDLPNAMNAAEITDKL LHSLRQR+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 114.005 bits (284), Expect = 1.469e-74
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +  S+F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.469e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVF NKQDLPNAMNAAEITDKL LHSLRQR+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 114.005 bits (284), Expect = 1.469e-74
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +  S+F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.469e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVF NKQDLPNAMNAAEITDKL LHSLRQR+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 114.005 bits (284), Expect = 1.469e-74
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +  S+F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_XENLA (ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.544e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 5.544e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_RAT (ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.544e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 5.544e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_MOUSE (ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.544e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 5.544e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_MACFA (ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 5.544e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 5.544e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
[Close]
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_HUMAN (ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.544e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2 
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 5.544e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1 
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73
The following BLAST results are available for this feature:
BLAST of EY753279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
ARF1_SOLTU1.470e-7792.31ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]
ARF_DUGJA1.469e-7483.49ADP-ribosylation factor OS=Dugesia japonica PE=2 S... [more]
ARF2_RAT1.469e-7486.54ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE1.469e-7486.54ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN1.469e-7486.54ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]
ARF1_XENLA5.544e-7486.54ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf... [more]
ARF1_RAT5.544e-7486.54ADP-ribosylation factor 1 OS=Rattus norvegicus GN=... [more]
ARF1_MOUSE5.544e-7486.54ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 ... [more]
ARF1_MACFA5.544e-7486.54ADP-ribosylation factor 1 OS=Macaca fascicularis G... [more]
ARF1_HUMAN5.544e-7486.54ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-A02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753279 ID=EY753279; Name=EY753279; organism=Citrus sinensis; type=EST; length=898bp
GGTACTGGTNACGCCTGCCCAGTATCGTGTCCGGGATTCCCGGGCTCGAC
ACACGCGGTCCGAAAAAAAAAGGGAAATTGGATCAAATCAATNAGGGTAG
TGCATGGATTTGAATAAATACCACTACCGTTGTTTCTCTGAGCAAAATTG
GTGCTGTGTTATACCAAGCCTATACATTCGAGTATATTTGCAAAGAAGGA
GATGCGAATTCTTATGGTGGAGATTGAGGACACAGGAAAAACCACAATTT
TATATAACCTTAAGTTAGGGGAGATCGTTACCACCATCCCCACCATTGGT
TTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTCTGGGA
TGTTGGAGGTCAAGACAAATATTCGGCCTTTGGGGAGACACTATTTTCGA
AATACACAAGGTCTTATCTTTGTGGTTGACAGCAATGATCGTGACCGTGT
TGTTGAGGCTAGAGATGAGCTGCACAGGATGTTGAATGAGGATGAGTTGA
GGGATGCTGTGTTGCTTGTGTTTGCAAACAAACAAGATCTTCCAAATGCA
ATGAATGCTGCCGAGATCACTGACAAGCTTGCCCTTCATTCTCTCCGACA
ACGTCACTGGTATATCCAGAGCACTTGTGCCACTTCTGGAGAAGGGCTCT
ACGAGGGACTAGACTGGCTCTCAAACACCATTGCTACCAAGCCTAAGTGG
ACTAGTTTTAGTCAAGCATTCGGAGACTGAAGTCAGTTGCAATTTATAAA
TGGATTTGCCTAAGTTTTGCTGGAGGTTCTATGCTGTTTATTCGGGATCC
AAGTCTTTAATTGTATGTAGGAAAGCAAGGTTACATTTTTTGGGGGCCCT
TTCTGGATACGGTGGGGGGGAAATCCAAACCTTTAAATTGAAATCCTT
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