EY753279

Overview
NameEY753279
Unique NameEY753279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.404e-18
Identity = 26/99 (26.26%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWL 670
            R +   Y R    ++++VD+ D++++  +++ELH +L++ +L+   +LV  NK+DL  A++  E+ +K+ L +++ R     S      + +   L WL
Sbjct:   79 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177          

HSP 2 Score: 53.1434 bits (126), Expect = 1.404e-18
Identity = 23/70 (32.86%), Postives = 44/70 (62.86%), Query Frame = 1
Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEI-VTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGE 387
            ++F K+EM + +V ++ +GKTT +  +  G+     IPT+GFN+  +   N++  +WD+GGQ ++ +  E
Sbjct:   14 ALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWE 83          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.092e-18
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLF 396
            +  S+  KK+MRIL++ ++  GKTTILY LKLGE V  +PT+GF VETVEYKN +F VWDVG   K     +  F
Sbjct:    8 LFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFF 82          

HSP 2 Score: 25.7942 bits (55), Expect = 3.092e-18
Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQG 412
            IRPL +H+F+NT+G
Sbjct:   74 IRPLWQHFFQNTKG 87          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL4C_MOUSE (ADP-ribosylation factor-like protein 4C OS=Mus musculus GN=Arl4c PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.692e-18
Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTIATKPK 697
            +RPL + Y R T G+I+VVDS D DR+ EA+ ELH++    E +   LLV ANKQDLP ++  AEI  +LALH L     +++Q  CA  GEGL EG+D L   I  + K
Sbjct:   75 LRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAEIEKQLALHELIPATTYHVQPACAIIGEGLTEGMDKLYEMILKRRK 184          

HSP 2 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKN-----ISFTVWDVGGQDKYSAFGETLFSKYTR 411
            I S+I A + + I+M+ ++  GKTT+LY LK  E V T+PTIGFN E ++  N     IS   WDVGGQ+K       L+  Y+R
Sbjct:    4 ISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKL----RPLWKSYSR 84          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL4C_HUMAN (ADP-ribosylation factor-like protein 4C OS=Homo sapiens GN=ARL4C PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.692e-18
Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTIATKPK 697
            +RPL + Y R T G+I+VVDS D DR+ EA+ ELH++    E +   LLV ANKQDLP ++  AEI  +LALH L     +++Q  CA  GEGL EG+D L   I  + K
Sbjct:   75 LRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAEIEKQLALHELIPATTYHVQPACAIIGEGLTEGMDKLYEMILKRRK 184          

HSP 2 Score: 69.3218 bits (168), Expect = 3.347e-11
Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKN-----ISFTVWDVGGQDKYSAFGETLFSKYTR 411
            I S+I A + + I+M+ ++  GKTT+LY LK  E V T+PTIGFN E ++  N     IS   WDVGGQ+K       L+  Y+R
Sbjct:    4 ISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKL----RPLWKSYSR 84          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL6_PONAB (ADP-ribosylation factor-like protein 6 OS=Pongo abelii GN=ARL6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIAT 688
            R L  HY++  Q +IFV+DS+DR R+V A++EL  +LN  ++  R   +L FANK DL +A+ + +++  L L +++ + W+I ++ A  GEGL EG+DWL + I T
Sbjct:   77 RNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQT 183          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL6_HUMAN (ADP-ribosylation factor-like protein 6 OS=Homo sapiens GN=ARL6 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17
Identity = 44/107 (41.12%), Postives = 71/107 (66.36%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIAT 688
            R L  HY++  Q +IFV+DS+DR R+V A++EL  +LN  ++  R   +L FANK DL +A+ + +++  L L +++ + W+I ++ A  GEGL EG+DWL + I T
Sbjct:   77 RNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQT 183          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF5_ARATH (Probable ADP-ribosylation factor At2g18390 OS=Arabidopsis thaliana GN=At2g18390 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.832e-17
Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IR   R+YF  T GL++VVDS+D  R+ + + EL  +L E+ L  + LL+ ANKQD+  A+   EI   L L S+ + RHW I    A +GEGL EG DWL   IA++
Sbjct:   73 IRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSLLILANKQDIQGALTPDEIGKVLNLESMDKSRHWKIVGCSAYTGEGLLEGFDWLVQDIASR 180          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL2_DROME (ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster GN=Arf84F PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.393e-17
Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  368 NIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            ++R   R+YF +T GL++VVDS DR R+     EL  +L E+ L  A LLV  NKQDLP A+++ EI + L L  +   HW +    A +GE L   +DWL   IA +
Sbjct:   72 SLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIAKR 179          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.331e-17
Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            R L  HY++  Q +IFV+DS+D+ R+V A++EL  +LN  ++  R   +L FANK DL +A+ + +++  L L  ++ + W+I ++ A  GEGL EG+DWL + I
Sbjct:   77 RNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL4A_RAT (ADP-ribosylation factor-like protein 4A OS=Rattus norvegicus GN=Arl4a PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.094e-17
Identity = 47/110 (42.73%), Postives = 70/110 (63.64%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTIATKPK 697
            +RPL + Y R T G++FVVDS D +R+ EA+ ELH++    E +   +L+ ANKQDL N+++ +EI   LA+  L     W++Q TCA  G+GL EGL+ L + I  + K
Sbjct:   82 LRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKRRK 191          
The following BLAST results are available for this feature:
BLAST of EY753279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
ARL8A_MOUSE1.404e-1826.26ADP-ribosylation factor-like protein 8A OS=Mus mus... [more]
ARL17_HUMAN3.092e-1853.33ADP-ribosylation factor-like protein 17 OS=Homo sa... [more]
ARL4C_MOUSE3.692e-1847.27ADP-ribosylation factor-like protein 4C OS=Mus mus... [more]
ARL4C_HUMAN3.692e-1847.27ADP-ribosylation factor-like protein 4C OS=Homo sa... [more]
ARL6_PONAB1.074e-1741.12ADP-ribosylation factor-like protein 6 OS=Pongo ab... [more]
ARL6_HUMAN1.074e-1741.12ADP-ribosylation factor-like protein 6 OS=Homo sap... [more]
ARF5_ARATH1.832e-1744.44Probable ADP-ribosylation factor At2g18390 OS=Arab... [more]
ARL2_DROME2.393e-1741.67ADP-ribosylation factor-like protein 2 OS=Drosophi... [more]
ARL6_BOVIN5.331e-1740.00ADP-ribosylation factor-like protein 6 OS=Bos taur... [more]
ARL4A_RAT9.094e-1742.73ADP-ribosylation factor-like protein 4A OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-A02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753279 ID=EY753279; Name=EY753279; organism=Citrus sinensis; type=EST; length=898bp
GGTACTGGTNACGCCTGCCCAGTATCGTGTCCGGGATTCCCGGGCTCGAC
ACACGCGGTCCGAAAAAAAAAGGGAAATTGGATCAAATCAATNAGGGTAG
TGCATGGATTTGAATAAATACCACTACCGTTGTTTCTCTGAGCAAAATTG
GTGCTGTGTTATACCAAGCCTATACATTCGAGTATATTTGCAAAGAAGGA
GATGCGAATTCTTATGGTGGAGATTGAGGACACAGGAAAAACCACAATTT
TATATAACCTTAAGTTAGGGGAGATCGTTACCACCATCCCCACCATTGGT
TTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTCTGGGA
TGTTGGAGGTCAAGACAAATATTCGGCCTTTGGGGAGACACTATTTTCGA
AATACACAAGGTCTTATCTTTGTGGTTGACAGCAATGATCGTGACCGTGT
TGTTGAGGCTAGAGATGAGCTGCACAGGATGTTGAATGAGGATGAGTTGA
GGGATGCTGTGTTGCTTGTGTTTGCAAACAAACAAGATCTTCCAAATGCA
ATGAATGCTGCCGAGATCACTGACAAGCTTGCCCTTCATTCTCTCCGACA
ACGTCACTGGTATATCCAGAGCACTTGTGCCACTTCTGGAGAAGGGCTCT
ACGAGGGACTAGACTGGCTCTCAAACACCATTGCTACCAAGCCTAAGTGG
ACTAGTTTTAGTCAAGCATTCGGAGACTGAAGTCAGTTGCAATTTATAAA
TGGATTTGCCTAAGTTTTGCTGGAGGTTCTATGCTGTTTATTCGGGATCC
AAGTCTTTAATTGTATGTAGGAAAGCAAGGTTACATTTTTTGGGGGCCCT
TTCTGGATACGGTGGGGGGGAAATCCAAACCTTTAAATTGAAATCCTT
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