EY753279

Overview
NameEY753279
Unique NameEY753279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL15_MOUSE (ADP-ribosylation factor-like protein 15 OS=Mus musculus GN=Arl15 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.164e-12
Identity = 37/110 (33.64%), Postives = 53/110 (48.18%), Query Frame = 2
Query:  368 NIRPLGRHYFRNTQGLIFVVDS-NDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            NIR     Y++ +QG+IFV+DS +  D +  AR+ELH  L   +L     L+ AN QD P A +  EI     L  L R + W +Q       + L +    L N +  K
Sbjct:   88 NIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDVDTLKDSFSQLINLLEEK 197          

HSP 2 Score: 34.6538 bits (78), Expect = 1.164e-12
Identity = 16/59 (27.12%), Postives = 32/59 (54.24%), Query Frame = 1
Query:  190 AKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 366
            A+ E  ++ + +  +GKT++L  L        + T GF+++ V ++N    V ++GG D
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSELCSESPENVVSTTGFSIKAVPFQNAVLNVKELGGAD 87          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 1.516e-12
Identity = 27/83 (32.53%), Postives = 49/83 (59.04%), Query Frame = 1
Query:  151 VLCYTKPIHSSIFAKKEMRILMVEIEDTGKTTILYNLK--LGEIVTT---------IPTIGFNVETVEYKNISFTVWDVGGQD 366
            ++ + K +   +  KK   ++++ +E+ GKTT+LYN+     E +TT         IPT GFNVE++  + + F +WD+GG++
Sbjct:    4 IISFIKNLFGFLTIKK---VMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKE 83          

HSP 2 Score: 38.5058 bits (88), Expect = 1.516e-12
Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 2
Query:  386 RHYFRNT-QGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 541
            RHY  +    +IFV DS+D + + E++ E   + N+  L++   L+ ANKQDL
Sbjct:   90 RHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDL 142          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.318e-12
Identity = 24/71 (33.80%), Postives = 42/71 (59.15%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLAL 586
            R + R Y+     ++++VD+NDR+R  EA+ EL  +L+++ L +   L+  NK D+P A +  E+   L L
Sbjct:   78 RRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGL 148          

HSP 2 Score: 38.5058 bits (88), Expect = 3.318e-12
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 360
            +K+ +IL + +++ GKTT+L+ LK   +V   PT     E +   NI F  +D+GG
Sbjct:   18 QKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGG 73          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 4.314e-12
Identity = 31/111 (27.93%), Postives = 56/111 (50.45%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN--------AMNAAEIT--DKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 676
            R L + Y+ +   +++++DS+ +DR VE++ EL  +L+ DEL +   L+  NK D+ N        ++   + T   K  L+ +R    ++ S       G  EG  WL+N
Sbjct:   78 RRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGNTSEEKFRASLGLTQTTGKGKTTLNGVRPIEVFMCS--VVKRYGYAEGFRWLAN 186          

HSP 2 Score: 40.0466 bits (92), Expect = 4.314e-12
Identity = 20/57 (35.09%), Postives = 33/57 (57.89%), Query Frame = 1
Query:  196 KEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 366
            K  +IL + +++ GKTT+L  LK G + + +PT     E +   NI F  +D+GG +
Sbjct:   19 KNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHE 75          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 7.270e-12
Identity = 33/110 (30.00%), Postives = 49/110 (44.55%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            R L + YF    G++F+VD+ D +R  EAR EL  +    EL+    ++  NK D P+A++  E+   L L +         QR   +         G  E   WLS  I
Sbjct:   81 RRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190          

HSP 2 Score: 38.1206 bits (87), Expect = 7.270e-12
Identity = 19/55 (34.55%), Postives = 32/55 (58.18%), Query Frame = 1
Query:  196 KEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 360
            K  ++L + +++ GKTT+L+ LK   + T  PT     E +   +I FT +D+GG
Sbjct:   22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGG 76          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 9.440e-12
Identity = 34/110 (30.91%), Postives = 48/110 (43.64%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            R L + YF    G++F+VD+ D +R  EAR EL  +    EL +    V  NK D P+A++  E+   L L +         QR   +         G  E   WLS  I
Sbjct:   81 RRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMNTTGYTKIEGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190          

HSP 2 Score: 40.0466 bits (92), Expect = 9.440e-12
Identity = 20/55 (36.36%), Postives = 32/55 (58.18%), Query Frame = 1
Query:  196 KEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 360
            K  ++L + +++ GKTT+L+ LK   + T  PT     E +   NI FT +D+GG
Sbjct:   22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGG 76          
The following BLAST results are available for this feature:
BLAST of EY753279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
ARL15_MOUSE1.164e-1233.64ADP-ribosylation factor-like protein 15 OS=Mus mus... [more]
ARLX_DICDI1.516e-1232.53ADP-ribosylation factor-like protein DDB_G0292332 ... [more]
SAR2_SOLLC3.318e-1233.80GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]
SAR1A_DICDI4.314e-1227.93GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
SAR1_ASHGO7.270e-1230.00Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN... [more]
SAR1_KLULA9.440e-1230.91Small COPII coat GTPase SAR1 OS=Kluyveromyces lact... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-A02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753279 ID=EY753279; Name=EY753279; organism=Citrus sinensis; type=EST; length=898bp
GGTACTGGTNACGCCTGCCCAGTATCGTGTCCGGGATTCCCGGGCTCGAC
ACACGCGGTCCGAAAAAAAAAGGGAAATTGGATCAAATCAATNAGGGTAG
TGCATGGATTTGAATAAATACCACTACCGTTGTTTCTCTGAGCAAAATTG
GTGCTGTGTTATACCAAGCCTATACATTCGAGTATATTTGCAAAGAAGGA
GATGCGAATTCTTATGGTGGAGATTGAGGACACAGGAAAAACCACAATTT
TATATAACCTTAAGTTAGGGGAGATCGTTACCACCATCCCCACCATTGGT
TTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTCTGGGA
TGTTGGAGGTCAAGACAAATATTCGGCCTTTGGGGAGACACTATTTTCGA
AATACACAAGGTCTTATCTTTGTGGTTGACAGCAATGATCGTGACCGTGT
TGTTGAGGCTAGAGATGAGCTGCACAGGATGTTGAATGAGGATGAGTTGA
GGGATGCTGTGTTGCTTGTGTTTGCAAACAAACAAGATCTTCCAAATGCA
ATGAATGCTGCCGAGATCACTGACAAGCTTGCCCTTCATTCTCTCCGACA
ACGTCACTGGTATATCCAGAGCACTTGTGCCACTTCTGGAGAAGGGCTCT
ACGAGGGACTAGACTGGCTCTCAAACACCATTGCTACCAAGCCTAAGTGG
ACTAGTTTTAGTCAAGCATTCGGAGACTGAAGTCAGTTGCAATTTATAAA
TGGATTTGCCTAAGTTTTGCTGGAGGTTCTATGCTGTTTATTCGGGATCC
AAGTCTTTAATTGTATGTAGGAAAGCAAGGTTACATTTTTTGGGGGCCCT
TTCTGGATACGGTGGGGGGGAAATCCAAACCTTTAAATTGAAATCCTT
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