EY753279 | Citrus Genome Database

Overview


Name	EY753279
Unique Name	EY753279
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	898

Libraries


Library Name	Type
Sweet orange leaf, field plant A	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_BOVIN (ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 5.544e-74
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 5.544e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1

Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_TAKRU (ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 9.430e-74
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWL+N +  K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180

HSP 2 Score: 111.309 bits (277), Expect = 9.430e-74
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1

Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S+  KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   11 SLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_RAT (ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 9.430e-74
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWL+N +  K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180

HSP 2 Score: 111.309 bits (277), Expect = 9.430e-74
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1

Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S+  KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   11 SLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_PONAB (ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 9.430e-74
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWL+N +  K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180

HSP 2 Score: 111.309 bits (277), Expect = 9.430e-74
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1

Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S+  KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   11 SLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_MOUSE (ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 9.430e-74
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWL+N +  K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180

HSP 2 Score: 111.309 bits (277), Expect = 9.430e-74
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1

Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S+  KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   11 SLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 9.430e-74
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWL+N +  K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180

HSP 2 Score: 111.309 bits (277), Expect = 9.430e-74
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1

Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S+  KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   11 SLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 9.430e-74
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQGLIFVVDSNDR+RV EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWL+N +  K
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180

HSP 2 Score: 111.309 bits (277), Expect = 9.430e-74
Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1

Query:  181 SIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S+  KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:   11 SLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 9.430e-74
Identity = 88/104 (84.62%), Postives = 97/104 (93.27%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLL+FANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 9.430e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1

Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 9.430e-74
Identity = 88/104 (84.62%), Postives = 97/104 (93.27%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            IRPL RHYF+NTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLL+FANKQDLPNAMNAAEITDKL LHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct:   74 IRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 177

HSP 2 Score: 112.464 bits (280), Expect = 9.430e-74
Identity = 54/66 (81.82%), Postives = 58/66 (87.88%), Query Frame = 1

Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
Sbjct:    8 LFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 73

BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 2.092e-73
Identity = 89/107 (83.18%), Postives = 98/107 (91.59%), Query Frame = 2

Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF+NTQG+IFVVDSNDRDRVVEAR+EL RMLNEDELRDA+LLVFANKQDLPNAMNAAEITDKL L SLRQR WYIQ+TCAT+G+GL+EGLDWLS  +  K
Sbjct:   77 IRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQRSWYIQATCATTGDGLFEGLDWLSTELKKK 183

HSP 2 Score: 110.538 bits (275), Expect = 2.092e-73
Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1

Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            +   +F KKEMRILMV ++  GKTTILY LKLGE+VTTIPTIGFNVETVEYKNI FTVWDVGGQDK
Sbjct:   11 LFDGLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDK 76

The following BLAST results are available for this feature:

BLAST of EY753279 vs. ExPASy Swiss-Prot

BLAST of EY753279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166


Match Name	E-value	Identity	Description
ARF1_BOVIN	5.544e-74	86.54	ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE...	[more]
ARF3_TAKRU	9.430e-74	84.11	ADP-ribosylation factor 3 OS=Takifugu rubripes GN=...	[more]
ARF3_RAT	9.430e-74	84.11	ADP-ribosylation factor 3 OS=Rattus norvegicus GN=...	[more]
ARF3_PONAB	9.430e-74	84.11	ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 ...	[more]
ARF3_MOUSE	9.430e-74	84.11	ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 ...	[more]
ARF3_HUMAN	9.430e-74	84.11	ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ...	[more]
ARF3_BOVIN	9.430e-74	84.11	ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE...	[more]
ARF1_LOCMI	9.430e-74	84.62	ADP-ribosylation factor 1 OS=Locusta migratoria GN...	[more]
ARF1_DROME	9.430e-74	84.62	ADP-ribosylation factor 1 OS=Drosophila melanogast...	[more]
ARF_NEUCR	2.092e-73	83.18	ADP-ribosylation factor OS=Neurospora crassa GN=NC...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS12-C1-001-001-A02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY753279 ID=EY753279; Name=EY753279; organism=Citrus sinensis; type=EST; length=898bp
GGTACTGGTNACGCCTGCCCAGTATCGTGTCCGGGATTCCCGGGCTCGAC
ACACGCGGTCCGAAAAAAAAAGGGAAATTGGATCAAATCAATNAGGGTAG
TGCATGGATTTGAATAAATACCACTACCGTTGTTTCTCTGAGCAAAATTG
GTGCTGTGTTATACCAAGCCTATACATTCGAGTATATTTGCAAAGAAGGA
GATGCGAATTCTTATGGTGGAGATTGAGGACACAGGAAAAACCACAATTT
TATATAACCTTAAGTTAGGGGAGATCGTTACCACCATCCCCACCATTGGT
TTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTCTGGGA
TGTTGGAGGTCAAGACAAATATTCGGCCTTTGGGGAGACACTATTTTCGA
AATACACAAGGTCTTATCTTTGTGGTTGACAGCAATGATCGTGACCGTGT
TGTTGAGGCTAGAGATGAGCTGCACAGGATGTTGAATGAGGATGAGTTGA
GGGATGCTGTGTTGCTTGTGTTTGCAAACAAACAAGATCTTCCAAATGCA
ATGAATGCTGCCGAGATCACTGACAAGCTTGCCCTTCATTCTCTCCGACA
ACGTCACTGGTATATCCAGAGCACTTGTGCCACTTCTGGAGAAGGGCTCT
ACGAGGGACTAGACTGGCTCTCAAACACCATTGCTACCAAGCCTAAGTGG
ACTAGTTTTAGTCAAGCATTCGGAGACTGAAGTCAGTTGCAATTTATAAA
TGGATTTGCCTAAGTTTTGCTGGAGGTTCTATGCTGTTTATTCGGGATCC
AAGTCTTTAATTGTATGTAGGAAAGCAAGGTTACATTTTTTGGGGGCCCT
TTCTGGATACGGTGGGGGGGAAATCCAAACCTTTAAATTGAAATCCTT