EY753279

Overview
NameEY753279
Unique NameEY753279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 9.964e-58
Identity = 65/102 (63.73%), Postives = 83/102 (81.37%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 676
            IRPL RHY+  TQGLIFVVD  DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +KL L  +R R+WY+Q +CATSG+GL EGL WL++
Sbjct:   70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTS 171          

HSP 2 Score: 101.293 bits (251), Expect = 9.964e-58
Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 1
Query:  178 SSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            S IF  KEMRILM+ ++  GKTTILY LKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDK
Sbjct:    6 SKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDK 69          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3)

HSP 1 Score: 143.28 bits (360), Expect = 6.369e-57
Identity = 74/129 (57.36%), Postives = 93/129 (72.09%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATKP-KWTSFSQAFGD*SQLQFING 754
            IR L RHYF+N QGLIFVVDS+D +R+ EAR+ELHR+L ++EL  A +LVFANKQD  NA+  AE+ +KL LHSL +R W IQ T A SG+GLYEGL+WLS TI  KP + TS S    D  + + + G
Sbjct:   74 IRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPNKPERSTSVSSFRSDSYERKLVRG 202          

HSP 2 Score: 97.4413 bits (241), Expect = 6.369e-57
Identity = 43/59 (72.88%), Postives = 54/59 (91.53%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            K ++RILMV ++ +GKTTILY LKLGE+VTT+PTIGFN+ETVEYK I+FTVWD+GGQ+K
Sbjct:   15 KSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEK 73          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.395e-53
Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL RHYF  T+GLIFVVDS D +R+ EAR ELHR++++ E+RD +LLV ANKQDLP A++ A+ITD L L  L+ R W +Q TCA +G+GL EGL WLS     K
Sbjct:   78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQNAKLK 184          

HSP 2 Score: 98.2117 bits (243), Expect = 1.395e-53
Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = 1
Query:  160 YTKPIHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            ++KP  S +F+ KEMRILM+ ++  GKTTILY LKL + V TIPT+GFNVETV YKNI F VWDVGGQDK
Sbjct:    9 FSKPF-SRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDK 77          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.534e-49
Identity = 52/107 (48.60%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IRPL +HY+  +  +IFVVDS DR+R+ E ++E+  +L +DEL+   +LVFANKQD+ NAMN AEI + L L+S++ R WY+Q   A   +G+YEG DW++N++  K
Sbjct:   82 IRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLNNK 188          

HSP 2 Score: 95.9005 bits (237), Expect = 2.534e-49
Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            I S    KKE RILM+ ++  GK+T+LY LKLG++V+TIPTIGFNVET+EYKN+S TVWDVGGQ K
Sbjct:   16 IFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVSTIPTIGFNVETIEYKNLSMTVWDVGGQHK 81          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.738e-47
Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            K  +RPL +HY+ NTQ ++FVVDS+ RDR+ EA  EL ++L E ELRDA+LL+FANKQD+  A++  EIT+ L+LH L   R WYIQ   A SG GLYEGLDWLS  +
Sbjct:  458 KHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565          

HSP 2 Score: 83.5741 bits (205), Expect = 1.738e-47
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  142 AKLVLCYTKPIHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            A + + +TK     I  K E+R++ + ++  GKTTIL+ LK  E +  IPTIGFNVETVEYKN+ FT+WDVGG+ K
Sbjct:  385 ASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHK 460          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.738e-47
Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            K  +RPL +HY+ NTQ ++FVVDS+ RDR+ EA  EL ++L E ELRDA+LL+FANKQD+  A++  EIT+ L+LH L   R WYIQ   A SG GLYEGLDWLS  +
Sbjct:  458 KHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565          

HSP 2 Score: 83.5741 bits (205), Expect = 1.738e-47
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  142 AKLVLCYTKPIHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            A + + +TK     I  K E+R++ + ++  GKTTIL+ LK  E +  IPTIGFNVETVEYKN+ FT+WDVGG+ K
Sbjct:  385 ASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHK 460          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.616e-47
Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCA-TSGEGLYEGLDWLSNTIATK 691
            IR L +HY+  T  +IFVVDS DR+R+ E ++E+  +L ++EL+   +L+FANKQD+ NAMN +EI D L L+S++ R WY+Q   A  S  G+YEG DW++N++  K
Sbjct:   82 IRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRKWYVQPCSAIKSPHGIYEGFDWVANSLNNK 189          

HSP 2 Score: 94.7449 bits (234), Expect = 8.616e-47
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSA 378
            I S    KK+ RILM+ ++  GK+T+LY LKLG+IV+T+PTIGFNVET+EYKN+S TVWDVGGQ K  A
Sbjct:   16 IFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRA 84          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.464e-46
Identity = 51/107 (47.66%), Postives = 75/107 (70.09%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            IR L +HY+  T  +IFVVDS DR+R+ E ++E+  +L +DEL+   +LV ANKQD+ NAMN AEI + L L+S++ R WY+Q   A   +G+YEG DW++N++  K
Sbjct:   82 IRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDNLLIQDELKGIQILVLANKQDMNNAMNTAEIVNSLNLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSLNNK 188          

HSP 2 Score: 90.5077 bits (223), Expect = 1.464e-46
Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSA 378
            I S    KK+ RILM+ ++  GK+T+L+ LKLG++V TIPTIGFNVET+ YKN+S TVWDVGGQ K  A
Sbjct:   16 IFSLFEGKKDTRILMIGLDGAGKSTLLFKLKLGDVVLTIPTIGFNVETIVYKNLSMTVWDVGGQHKIRA 84          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.886e-46
Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            K  +RPL +HY+ NTQ ++FVVDS+ RDR+ EA  EL ++L E ELRDA+LL+FANKQD+  A++  EIT+ L+LH L   R WYIQ   A SG GLYEGLDWLS  +
Sbjct:  438 KHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 545          

HSP 2 Score: 80.1073 bits (196), Expect = 1.886e-46
Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 1
Query:  142 AKLVLCYTKPIHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK 369
            A + + +TK     I  K E+R++ + ++  GKTTIL+ LK  E +  IPTIGFNVETVEYKN+ FT+WDVG + K
Sbjct:  365 ASIPVTFTKDNRVYIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGEKHK 440          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 115.931 bits (289), Expect = 4.581e-45
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            +T+IRP  R Y+ +T  +IFVVDS D+DR+  A  ELH ML E+EL+DA LLVFANKQD P A++A+E++ +L L  L+ R W I ++ A  GEG+ EGLDWL + I
Sbjct:   72 QTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 178          

HSP 2 Score: 85.1149 bits (209), Expect = 4.581e-45
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  172 IHSSIFAK-----KEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQ 363
            I SS+F K     KE+RIL++ ++  GKTTILY L++GE+VTT PTIGFNVET+ YKN+   VWD+GGQ
Sbjct:    4 IFSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQ 72          
The following BLAST results are available for this feature:
BLAST of EY753279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
ARF3_DROME9.964e-5863.73ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARF4_ARATH6.369e-5757.36Probable ADP-ribosylation factor At2g15310 OS=Arab... [more]
ARF2_SCHPO1.395e-5358.88Probable ADP-ribosylation factor OS=Schizosaccharo... [more]
ARFJ_DICDI2.534e-4948.60ADP-ribosylation factor J OS=Dictyostelium discoid... [more]
ARD1_MOUSE1.738e-4757.41GTP-binding protein ARD-1 OS=Mus musculus GN=Trim2... [more]
ARD1_HUMAN1.738e-4757.41GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM2... [more]
ARFH_DICDI8.616e-4747.22ADP-ribosylation factor H OS=Dictyostelium discoid... [more]
ARFK_DICDI1.464e-4647.66ADP-ribosylation factor K OS=Dictyostelium discoid... [more]
ARD1_RAT1.886e-4657.41GTP-binding protein ARD-1 (Fragment) OS=Rattus nor... [more]
ARL1_YEAST4.581e-4553.27ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-A02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753279 ID=EY753279; Name=EY753279; organism=Citrus sinensis; type=EST; length=898bp
GGTACTGGTNACGCCTGCCCAGTATCGTGTCCGGGATTCCCGGGCTCGAC
ACACGCGGTCCGAAAAAAAAAGGGAAATTGGATCAAATCAATNAGGGTAG
TGCATGGATTTGAATAAATACCACTACCGTTGTTTCTCTGAGCAAAATTG
GTGCTGTGTTATACCAAGCCTATACATTCGAGTATATTTGCAAAGAAGGA
GATGCGAATTCTTATGGTGGAGATTGAGGACACAGGAAAAACCACAATTT
TATATAACCTTAAGTTAGGGGAGATCGTTACCACCATCCCCACCATTGGT
TTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTCTGGGA
TGTTGGAGGTCAAGACAAATATTCGGCCTTTGGGGAGACACTATTTTCGA
AATACACAAGGTCTTATCTTTGTGGTTGACAGCAATGATCGTGACCGTGT
TGTTGAGGCTAGAGATGAGCTGCACAGGATGTTGAATGAGGATGAGTTGA
GGGATGCTGTGTTGCTTGTGTTTGCAAACAAACAAGATCTTCCAAATGCA
ATGAATGCTGCCGAGATCACTGACAAGCTTGCCCTTCATTCTCTCCGACA
ACGTCACTGGTATATCCAGAGCACTTGTGCCACTTCTGGAGAAGGGCTCT
ACGAGGGACTAGACTGGCTCTCAAACACCATTGCTACCAAGCCTAAGTGG
ACTAGTTTTAGTCAAGCATTCGGAGACTGAAGTCAGTTGCAATTTATAAA
TGGATTTGCCTAAGTTTTGCTGGAGGTTCTATGCTGTTTATTCGGGATCC
AAGTCTTTAATTGTATGTAGGAAAGCAAGGTTACATTTTTTGGGGGCCCT
TTCTGGATACGGTGGGGGGGAAATCCAAACCTTTAAATTGAAATCCTT
back to top