EY753279

Overview
NameEY753279
Unique NameEY753279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.300e-27
Identity = 42/105 (40.00%), Postives = 71/105 (67.62%), Query Frame = 2
Query:  374 RPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            R L  HY+++ Q +IFV+DS+D+ R+V A++EL  +LN  ++  R   +L FANK DL +++ + +++  L L S++ + W+I ++ A  GEGL EG+DWL + I
Sbjct:   77 RNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181          

HSP 2 Score: 53.9138 bits (128), Expect = 1.300e-27
Identity = 25/62 (40.32%), Postives = 43/62 (69.35%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKY 372
            KKE+ +L + ++++GKTTI+  LK     +   +PTIGF++E  +  ++SFTV+D+ GQ +Y
Sbjct:   15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRY 76          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.299e-25
Identity = 36/107 (33.64%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            ++ +R   + +   T  L++V+DS D  R+ EA  EL  +L++  +    LLV ANKQ++P A++  EI D+L L     R W +++  A +G GL E L+ L + +
Sbjct:   67 QSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGRSWDLRACSALTGAGLPEALESLRSLL 173          

HSP 2 Score: 64.3142 bits (155), Expect = 4.299e-25
Identity = 29/63 (46.03%), Postives = 46/63 (73.02%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKYSA 378
            + E +++M+ ++  GKTT+LY LK  ++V T+PT+GFNVE +E   ++S T+WDVGGQ +  A
Sbjct:   10 RAEAQVVMMGLDSAGKTTLLYRLKGYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRA 72          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 5.319e-25
Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIAT 688
            IR L ++YF NT  L+FVVDS+D +R+ EA++EL  +L E EL D+ LLVFANKQD+PNA + AE+T  L L SL+ R W+I  T A SG+GLYEGL W+   + T
Sbjct:   74 IRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMKT 179          

HSP 2 Score: 85.5001 bits (210), Expect = 4.513e-16
Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLFSKYT 408
            I S +F   E R LM+ ++  GKTTILY LKL E V TIPTIGFNVETV ++ I+ TVWDVGGQ K  A  +  F   T
Sbjct:    8 ISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTT 86          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.288e-25
Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKYSA 378
            K E +++M+ ++  GKTTILY LK  ++V T+PT+GFNVE +E   ++S T+WD+GGQ +  A
Sbjct:   10 KAEAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRA 72          

HSP 2 Score: 66.6254 bits (161), Expect = 7.288e-25
Identity = 34/110 (30.91%), Postives = 59/110 (53.64%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            +T +R   + Y      L++V+DS D  R+ EA  EL  +L +  +     LV ANKQ+ P A+   EI ++L L   ++  W +++  A +G+GL E L  L + + ++
Sbjct:   67 QTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGFQKHCWELRACSALTGQGLQEALQSLLHLLKSR 176          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.236e-24
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATKPK 697
            IRP  ++YF NT  L                 EL  +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+   +  K K
Sbjct:   74 IRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 165          

HSP 2 Score: 56.6102 bits (135), Expect = 1.236e-24
Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 1
Query:  196 KEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLF 396
            +E+RIL++ +++ GKTT+L  L   +I    PT GFN+++V+ +     VWD+GGQ K   + +  F
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYF 82          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.088e-24
Identity = 36/104 (34.62%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            +R   ++YF +T+ +I+VVDS D  R+ E R+ L  +L E++L    +LV ANK D+  A+++ EI+  L +   +  HW I S  A +G  + + + WL+N +
Sbjct:   73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176          

HSP 2 Score: 58.9214 bits (141), Expect = 2.088e-24
Identity = 25/68 (36.76%), Postives = 43/68 (63.24%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLF 396
            ++E+R+L++ +++ GKTTIL  L   ++    PT GF + T+E + + FT+WD+GGQ     F +  F
Sbjct:   14 EREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYF 81          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.987e-24
Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 2
Query:  392 YFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            YF ++QG+IFV+DS+DR R+   +DEL  +L+  ++  R   +++ ANK D+P AM  A+IT  L L+  R   W I STCA +G+GL + +  LS+ I
Sbjct:   83 YFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKDVASRGIPVVILANKMDIPGAMTCADITAALGLNLHRSGTWSIHSTCALTGDGLDKAMQQLSSEI 181          

HSP 2 Score: 50.8322 bits (120), Expect = 5.987e-24
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLF 396
            KK++ I++V ++++GKTTIL  LK  E  +   +PT+G  V     +N+SF  +D+ GQ KY +  E+ F
Sbjct:   15 KKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYF 84          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.987e-24
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  392 YFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTI 682
            YF ++QG+IFV+DS+DR R+   +DEL  ++   ++  R   +++ ANK D+P AM A++IT  L L+  R   W I STCA +G+GL + +  LS  I
Sbjct:   83 YFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181          

HSP 2 Score: 51.9878 bits (123), Expect = 5.987e-24
Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 1
Query:  178 SSIFA--KKEMRILMVEIEDTGKTTILYNLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLF 396
            SS+F   KK++ I++V ++++GKTTIL  LK  E  +   +PT+G  V     +N+SF  +D+ GQ KY +  E+ F
Sbjct:    8 SSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYF 84          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.318e-23
Identity = 34/107 (31.78%), Postives = 59/107 (55.14%), Query Frame = 2
Query:  371 IRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            +R   + Y   T  L++V+DS D  R+ E+  EL  +LN+  +     LV ANKQ+ P+A+   +I ++L+L   +   W ++   A +GEGL E L  L + + ++
Sbjct:   70 LRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEGLPEALQSLWSLLKSR 176          

HSP 2 Score: 63.1586 bits (152), Expect = 1.318e-23
Identity = 28/58 (48.28%), Postives = 44/58 (75.86%), Query Frame = 1
Query:  193 KKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQ 363
            K E +++M+ ++  GKTT+LY LK  ++V T+PT+GFNVE ++   ++S T+WDVGGQ
Sbjct:   10 KAEAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQ 67          
BLAST of EY753279 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.919e-23
Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 2
Query:  362 KTNIRPLGRHYFRNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLALHSLRQRHWYIQSTCATSGEGLYEGLDWLSNTIATK 691
            +T+IRP  R Y+ NT  +I+VVDS DRDR+  ++ EL  ML E+ELR A+L+VFANKQD+  AM ++E+ + L L +L+ R W I  T AT G GL E ++WL  T+ ++
Sbjct:   71 QTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          

HSP 2 Score: 95.9005 bits (237), Expect = 3.339e-19
Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 1
Query:  172 IHSSIFAKKEMRILMVEIEDTGKTTILYNLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKYSAFGETLFS 399
            I SS+F  +EMRIL++ ++  GKTTILY L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ     +    +S
Sbjct:    8 IFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYS 83          
The following BLAST results are available for this feature:
BLAST of EY753279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
ARL6_MOUSE1.300e-2740.00ADP-ribosylation factor-like protein 6 OS=Mus musc... [more]
ARL11_BOVIN4.299e-2533.64ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARF11_CAEEL5.319e-2554.72ADP-ribosylation factor 1-like 1 OS=Caenorhabditis... [more]
ARL11_MOUSE7.288e-2547.62ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
ARL3_PONAB1.236e-2438.53ADP-ribosylation factor-like protein 3 OS=Pongo ab... [more]
ARL_SCHPO2.088e-2434.62ADP-ribosylation factor-like protein alp41 OS=Schi... [more]
ARL6_CAEBR5.987e-2442.42ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL6_CAEEL5.987e-2441.41ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL11_HUMAN1.318e-2331.78ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARL1_HUMAN2.919e-2348.18ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-A02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753279 ID=EY753279; Name=EY753279; organism=Citrus sinensis; type=EST; length=898bp
GGTACTGGTNACGCCTGCCCAGTATCGTGTCCGGGATTCCCGGGCTCGAC
ACACGCGGTCCGAAAAAAAAAGGGAAATTGGATCAAATCAATNAGGGTAG
TGCATGGATTTGAATAAATACCACTACCGTTGTTTCTCTGAGCAAAATTG
GTGCTGTGTTATACCAAGCCTATACATTCGAGTATATTTGCAAAGAAGGA
GATGCGAATTCTTATGGTGGAGATTGAGGACACAGGAAAAACCACAATTT
TATATAACCTTAAGTTAGGGGAGATCGTTACCACCATCCCCACCATTGGT
TTCAATGTGGAGACTGTGGAATACAAGAATATTAGCTTCACTGTCTGGGA
TGTTGGAGGTCAAGACAAATATTCGGCCTTTGGGGAGACACTATTTTCGA
AATACACAAGGTCTTATCTTTGTGGTTGACAGCAATGATCGTGACCGTGT
TGTTGAGGCTAGAGATGAGCTGCACAGGATGTTGAATGAGGATGAGTTGA
GGGATGCTGTGTTGCTTGTGTTTGCAAACAAACAAGATCTTCCAAATGCA
ATGAATGCTGCCGAGATCACTGACAAGCTTGCCCTTCATTCTCTCCGACA
ACGTCACTGGTATATCCAGAGCACTTGTGCCACTTCTGGAGAAGGGCTCT
ACGAGGGACTAGACTGGCTCTCAAACACCATTGCTACCAAGCCTAAGTGG
ACTAGTTTTAGTCAAGCATTCGGAGACTGAAGTCAGTTGCAATTTATAAA
TGGATTTGCCTAAGTTTTGCTGGAGGTTCTATGCTGTTTATTCGGGATCC
AAGTCTTTAATTGTATGTAGGAAAGCAAGGTTACATTTTTTGGGGGCCCT
TTCTGGATACGGTGGGGGGGAAATCCAAACCTTTAAATTGAAATCCTT
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