GE213155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.011e-31 Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRT 221 +AGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRT Sbjct: 23 QAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRT 89
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.011e-31 Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRT 221 +AGTIRKNGYIVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNRT Sbjct: 22 QAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRT 88
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.320e-31 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRT 221 +AGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNRT Sbjct: 23 QAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRT 89
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.941e-31 Identity = 61/67 (91.04%), Postives = 66/67 (98.51%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRT 221 +AGTIRK+G+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRT Sbjct: 23 QAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRT 89
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.840e-31 Identity = 61/67 (91.04%), Postives = 65/67 (97.01%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRT 221 +AGTIRK G+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRT Sbjct: 23 QAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRT 89
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.117e-30 Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = -1 Query: 24 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 221 +AGTIRK+G+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNR Sbjct: 23 QAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNR 88
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.251e-30 Identity = 60/67 (89.55%), Postives = 64/67 (95.52%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRT 221 +AGTIRK G+IVIK+R CKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHNCDVPHVNRT Sbjct: 23 QAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRT 89
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.459e-30 Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = -1 Query: 21 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDI-VPSSHNCDVPHVNRT 221 +AGTIRKNGYIVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLE++ VPSSHNCDVPHVNRT Sbjct: 23 QAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRT 90
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.595e-29 Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = -1 Query: 24 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 221 +AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNR Sbjct: 22 QAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNR 87
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.595e-29 Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = -1 Query: 24 AGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 218 AG IRK G+IVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHNCDVPHVNR Sbjct: 23 AGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNR 87 The following BLAST results are available for this feature:
BLAST of GE213155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213155 ID=GE213155; Name=GE213155; organism=Citrus sinensis; type=EST; length=236bpback to top |