GE213155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A1_SCHPO (Eukaryotic translation initiation factor 5A-1 OS=Schizosaccharomyces pombe GN=tif51a PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.048e-20 Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = -1 Query: 24 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 221 + +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+G+K ED+ PS+HN DVP V R Sbjct: 23 QCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKR 88
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.983e-20 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = -1 Query: 24 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 221 + +RKN +++I+ RPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R Sbjct: 25 QCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKR 90
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.874e-20 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = -1 Query: 24 RAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 221 + +RKNG++VIK PCK+V++STSKTGKHGHAK + IDIF+GKK E+I PS+HN DVP+V+R Sbjct: 26 QCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSR 91
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.517e-11 Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = -1 Query: 15 AGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTSA 218 AG I+ +IVI PCKVVEV SKTGKHG AK VGI F G K +VP+ +VP + + +A Sbjct: 8 AGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTA 75
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A_CALMQ (Translation initiation factor 5A OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.380e-11 Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = -1 Query: 15 ARAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTSA 224 A AG I++ YI+I + PC+VVEV SKTGKHG AK VGI + G K +VP+ +VP + + +A Sbjct: 6 ASAGDIKEGSYIMIDNMPCRVVEVEKSKTGKHGSAKARIVGIGVIDGVKRTIVVPTDAAVEVPVIEKFTA 75
BLAST of GE213155 vs. ExPASy Swiss-Prot
Match: IF5A_AERPE (Translation initiation factor 5A OS=Aeropyrum pernix GN=eif5a PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.765e-11 Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = -1 Query: 24 ARAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNR 224 A G ++K YIVI PC++VE+S +KTGKHG AK H V I +FSG+K + P +P + + Sbjct: 6 ATLGDLKKGSYIVIDGEPCRIVEMSRAKTGKHGSAKAHVVAICVFSGQKKSLVAPVDTRVQIPVIEK 72 The following BLAST results are available for this feature:
BLAST of GE213155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213155 ID=GE213155; Name=GE213155; organism=Citrus sinensis; type=EST; length=236bpback to top |