GE213153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS15A_PONAB (40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.965e-51 Identity = 97/125 (77.60%), Postives = 110/125 (88.00%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MVR++VL DALKS+ NAEKRGKRQV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W L PSRQFG+IVLTTSAGIMDHEEARRK+ GGK+ Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLFPSRQFGFIVLTTSAGIMDHEEARRKHTGGKI 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS15B_DROME (40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab PE=2 SV=3) HSP 1 Score: 200.675 bits (509), Expect = 2.567e-51 Identity = 97/125 (77.60%), Postives = 109/125 (87.20%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MVR++VL DALK + NAEKRGKRQV++RP SKVIIKFL VM KHGYIGEFE V+DHRAGKIVV L GRLNKCGVISPRFD + +IE WT LLPSRQFGY+VLTTS GIMDHEEARRK++GGK+ Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVEDHRAGKIVVNLTGRLNKCGVISPRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKI 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS15A_ICTPU (40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 2.838e-50 Identity = 96/124 (77.42%), Postives = 108/124 (87.10%), Query Frame = -3 Query: 26 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGK 397 MVR++VL DALK + NAEKRGK QV+IRP SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLNKCGVISPRFDV +K++E W LLPSRQFG+IVLTTSAGIMDHEEARRK+ GGK Sbjct: 1 MVRMNVLADALKCINNAEKRGKAQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGK 124
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS15A_PARLI (40S ribosomal protein S15a OS=Paracentrotus lividus GN=RPS15A PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 4.841e-50 Identity = 95/125 (76.00%), Postives = 109/125 (87.20%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MVR++VL AL+ + NAEKR KRQV+IRP SKV IKFL+VM KHGYIGEFE VDDHR GKI+V LNGRLNKCGVISPRFDV + ++E WT+ LLPSRQFGY+VLTTS GIMDHEEARRK+VGGK+ Sbjct: 1 MVRMNVLAAALRCICNAEKRCKRQVLIRPCSKVTIKFLMVMIKHGYIGEFEVVDDHRGGKIIVNLNGRLNKCGVISPRFDVPINDMEKWTSNLLPSRQFGYVVLTTSGGIMDHEEARRKHVGGKI 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS22_AGABI (40S ribosomal protein S22 OS=Agaricus bisporus GN=rps22 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.469e-48 Identity = 92/125 (73.60%), Postives = 107/125 (85.60%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MVR+SVLND LKS+ NA +RGKRQV++RPSSKV++KFL VMQ+HGYIGEFE +DDHR GKI+V+LNGRLNK GVISPRF+V IE W LLPSR G IVLTTS+GI+DHEEARRKNVGGK+ Sbjct: 1 MVRISVLNDCLKSICNASRRGKRQVIVRPSSKVVVKFLSVMQRHGYIGEFEIIDDHRGGKIIVQLNGRLNKTGVISPRFNVQHNRIEQWINYLLPSRGIGIIVLTTSSGILDHEEARRKNVGGKL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS15A_DICDI (40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a PE=2 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 8.544e-47 Identity = 89/125 (71.20%), Postives = 107/125 (85.60%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MVR+SVLND L S+ NAE++GKRQV++RPSSKVI+KFL VM K YIGEFE VDDHR+GKIV++L GR+NKCGVISPRFDV + EIE W + LLPSRQFG+IVLTTS GIMDH EA+ ++ GGK+ Sbjct: 1 MVRISVLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGKIVIDLIGRINKCGVISPRFDVTLDEIEKWASYLLPSRQFGHIVLTTSLGIMDHNEAKTRHTGGKL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS22_SCHPO (40S ribosomal protein S22 OS=Schizosaccharomyces pombe GN=rps22a PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 4.240e-46 Identity = 88/125 (70.40%), Postives = 105/125 (84.00%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MVR SVL D L ++ NAE+RG+RQV+IRPSSKVI+KFL VMQKHGYI EF +DDHR+GKIV++LNGR+NKCGVISPRF+V +K+IE W +LLPSRQ G IVLTTS GIM H EAR K+ GGK+ Sbjct: 1 MVRQSVLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQKHGYIDEFTEIDDHRSGKIVIQLNGRINKCGVISPRFNVKLKDIEKWVNQLLPSRQVGVIVLTTSRGIMSHNEARAKDAGGKI 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_CALMQ (30S ribosomal protein S8P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps8p PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.668e-32 Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV + VL++AL S+ NAE RG RQV+I PSSK+I L VMQ++GY+GEFEYV D R GK VV+L GR+N G I PRF V V E++ W + LP+RQ G ++LTTS G++ H EAR VGG Sbjct: 1 MVMLDVLSNALMSVKNAESRGDRQVIIWPSSKLIGNVLRVMQRYGYVGEFEYVYDGRGGKYVVQLLGRINDIGAIKPRFHVKVDELQKWEEKYLPARQVGILILTTSKGVVSHLEARENRVGG 123
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.730e-31 Identity = 63/120 (52.50%), Postives = 89/120 (74.17%), Query Frame = -3 Query: 23 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 382 +LNDAL+++ NAE+RGK V ++P S V+ FL +M++ GYI F+ D HR G+I V+L GR+N C ++ R DV KEIE +T R LP+RQ+GY+V+TT GI+DHEEA ++NVGG+V Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQV 124
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_PYRFU (30S ribosomal protein S8P OS=Pyrococcus furiosus GN=rps8p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.912e-30 Identity = 63/125 (50.40%), Postives = 89/125 (71.20%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 M + L +AL + N+E+ GKR+V I+P+SK+I + L VMQK+GYIGEFE++DD RAG V+L GR+NK G I PRF V V E E W R LP+ +FG ++++TS G+M H+EA K +GG++ Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRL 125 The following BLAST results are available for this feature:
BLAST of GE213153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213153 ID=GE213153; Name=GE213153; organism=Citrus sinensis; type=EST; length=465bpback to top |